Synechococcus sp. RCC307: SynRCC307_1194
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Entry
SynRCC307_1194 CDS
T00523
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr00550
Peptidoglycan biosynthesis
syr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SynRCC307_1194 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
syr01002
]
SynRCC307_1194 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syr01011
]
SynRCC307_1194 (dacB)
Enzymes [BR:
syr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SynRCC307_1194 (dacB)
Peptidases and inhibitors [BR:
syr01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SynRCC307_1194 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
syr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SynRCC307_1194 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
MAPKK1_Int
Motif
Other DBs
NCBI-ProteinID:
CAK28097
CyanoBase:
SynRCC307_1194
UniProt:
A5GT88
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All DBs
Position
1052188..1053507
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AA seq
439 aa
AA seq
DB search
MGKRLCFAALALLIPAAVQAQGLESLLSSIEEDNENKLNPVAEHPPLTPPPFLAPVGLPL
QQASTICPALQKAVVAATGAESGVWSITVADRNGMVLADLHGNKSRIPASNQKLISTAIA
MDRLGPNHRISTELWRLPNGTFRIQGGGDPTFGFSGLRRFAKLAAGSGGGSSTSSGTVKL
QLEEEHASRWWPQGWSQPDRSYAYGAPITRLAVTSNAVDLSVRNPPQRLKRLLNSEIYRN
GANAEISTIPAGTPEPAGSVLLHSESSKSMHHLMSLANGESHNFTAEVLLREGTGSWSLP
EAQRRAMSWMRQQGLPIAGVRVADGSGLDRANRVTSRLLTALMLRMEQHPYAKNYYASMA
VAGERGTLRYYFQGSPLKGRFRGKTGTISGVKAVSGKLDTNNGPLYVSMISNGSWGPVGV
MQRVLMASLKQSGCRPVSL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgtctttgcttcgccgccttggcgttgttgattcctgctgcggtgcaagcc
caaggtctcgaatcgctgctcagcagcatcgaagaggacaacgaaaacaagctcaatcct
gtggcggagcatccgcccctcaccccgcccccgttcttggcaccagtggggcttccgctg
cagcaggccagcaccatttgccctgcgcttcagaaagccgttgtggccgccaccggagcg
gagtcgggtgtctggagcatcaccgtggccgatcgcaacggcatggtcttggccgatttg
catggcaacaagtcgcgcattcccgcctcgaaccaaaagctgatcagcaccgcgatcgcc
atggatcgcctcggccccaaccaccgcatcagcacggagctctggcgcttgcccaatggc
accttccgcatccaaggcggtggtgatcccacctttggctttagtggattgcgccgcttt
gccaagttggctgctggttctggaggaggcagctccaccagctcaggcaccgtgaaattg
cagctggaggaagaacatgcttcccgctggtggccccagggctggtcgcaacctgatcgc
agctatgcctatggcgcaccgatcacccgtctggcggtgacctcaaatgctgtggatctc
tcggttcgcaacccgcctcagcgtctcaagcgcttgctcaatagtgagatttatcgcaac
ggcgccaacgctgagatcagcacgatccctgcgggcacccctgaacccgccggcagcgtt
ttgctgcacagcgagtcatcgaagtcgatgcatcacctcatgagcctggccaatggggaa
agccataacttcacggccgaggtgttgttgcgtgaaggcacgggttcttggtccctaccg
gaagcccaacggcgagccatgtcatggatgcgccaacaggggctccccatcgcaggggta
cgcgtcgccgatggttccgggcttgaccgtgccaaccgcgtcaccagccgactgttaaca
gctttgatgttgcggatggagcagcacccctacgccaaaaactattacgcgagcatggcc
gtcgccggtgagcggggaaccctccgctactacttccagggctcaccactgaagggacgt
ttccgcggcaaaaccggcacgattagcggcgtgaaagcggtgagcggcaagctcgacacc
aacaacggtccgctttacgtgagcatgatttccaacggatcctggggaccggttggggtg
atgcagcgggtgctgatggccagcctcaagcagagcggctgccgtcccgtgtctctttaa
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