Synechococcus sp. RCC307: SynRCC307_1261
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Entry
SynRCC307_1261 CDS
T00523
Name
(GenBank) Predicted permease
KO
K11720
lipopolysaccharide export system permease protein
Organism
syr
Synechococcus sp. RCC307
Pathway
syr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SynRCC307_1261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syr02000
]
SynRCC307_1261
Transporters [BR:
syr02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
SynRCC307_1261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
CAK28164
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Position
complement(1116003..1117214)
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AA seq
403 aa
AA seq
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MTVSSSSFLQESANLVRRGQSQAIRQWRRLPLMDRWLTGELLGPLLFGIAAFTAVTLSVG
VLFELVRKVAEAGLPMGVAVQVLFLRLPGFLVLSFPMATLIATLLAYSRLSGGSELTALR
SIGVATYRFVIPGLVLAGLMSVLTFVFNDVLVPPANRAGYVMLHKSLGRSIDSEKGGNII
YPRYGRVTDGPKDNKERLIQLFYAKEFKDGKMMDVTLIDFSRAGQKQLLSAEEAVFMEGR
GTWEFRRGSIINVADRGGRNTTADFNTYYYPLGEGPLDLASLPKDVNVMSVAEANQALEI
IEEAGDRKAARKMRVRLQEKFSFPAICLVFGLIGASLGSRPNTRTSRSQGFGISVLLIFV
YYLLAFVFSSLGVKGTLTPFLSAWTPVLIGLGGGLLLLRQASR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtgagttcctcgtccttcttgcaggagtccgcaaatttggtccgccgcggtcag
agccaggcgattcgccaatggcgccggctccccctgatggatcgctggctcaccggcgaa
ttactgggcccgctgctgtttggcattgcggccttcaccgcggtgaccctctcggttggg
gtgctgtttgagctggttcgcaaggtggccgaagccgggctgcccatgggcgtggccgtc
caggtgttgtttttgcggttgccgggcttcttggtgctgtcgttcccgatggccaccctg
attgccaccttgctggcctacagccgcctctccggcggtagcgagctcaccgcactgcgc
agcattggtgtggccacctatcgattcgtgattccaggcctggtgctagccggcttgatg
agtgtgctcacctttgtgtttaacgacgttctggtgccgccagccaatcgcgctggctac
gtgatgctgcacaagtcgttgggacgcagcatcgattcggaaaaaggcggaaacatcatc
tacccccgctatgggcgtgtgaccgatgggcccaaggacaacaaagagcgattgatccag
ctcttctatgccaaggaattcaaagacggaaaaatgatggacgtcacgctgatcgatttc
agccgtgccggccagaaacaacttctcagtgccgaagaggccgtgttcatggaaggtcgc
ggcacctgggaattccgccgcggcagcatcatcaatgtggccgatcgcggcgggcgcaac
accaccgctgacttcaacacctattactacccacttggtgaaggcccactggatttggcg
tctctgcccaaggacgtcaatgtgatgtcagttgccgaagccaatcaggctctggagatc
attgaagaagccggtgatcgcaaggctgcccgcaagatgcgggtgcggctccaggagaag
ttctcctttccggccatctgcttggtgttcggtttgatcggagcgagcttgggctcgagg
cccaacacccgcaccagccgcagccagggctttggcatcagcgtgctgctgatctttgtc
tattacctgctggcgtttgtgttcagctccttgggcgtcaaaggcaccctcacccccttc
ctctcggcatggactccggtgctgatcggtttgggtggcggtttgcttctactcaggcaa
gccagccgctga
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