Synechococcus sp. RCC307: SynRCC307_1454
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Entry
SynRCC307_1454 CDS
T00523
Name
(GenBank) Putative group 3 RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
syr
Synechococcus sp. RCC307
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syr03021
]
SynRCC307_1454
Transcription machinery [BR:
syr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SynRCC307_1454
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_24
HTH_23
Sigma70_ECF
Sigma70_r4_2
DNA_pol3_delta_C
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
CAK28357
UniProt:
A5GTZ8
LinkDB
All DBs
Position
complement(1292014..1292793)
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AA seq
259 aa
AA seq
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MTKFQAPTPELLALHRRYGQSRCLKLRNRLVEAHLNLVRQQAARFSQASSACYDDLFQQG
CFGLLDAVQRYQPQRGYAFSTYAVTLIRGQMQHYLRDRHHLIRSPWRLRQLLSRWDQLQN
QRQQAGLPPLDRRGQARSLGCRVERLQMALQMRAALNLRSFDAAPEGIAFETADQRPTPE
ARLAEAELEEWIEAQSPDDQLLLCGVMHQGLSQRQLARQLDWSPCRVNRRLQQLRQQVLQ
QFNATPPSRPRRQWPSSGH
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatttcaagcgccgacgcccgagctgttggccttgcatcgccgctatggccag
agccgttgcctcaagcttcgcaaccggcttgttgaagcccacctcaatctcgtgcgtcag
caggccgcccgcttttcccaggccagcagcgcctgctacgacgacttgtttcagcagggc
tgctttgggctgctcgatgctgttcagcgctaccaaccgcagcgcggctatgccttcagc
acctatgcggtcacgttgattcgcggccaaatgcagcactacctgcgcgatcggcaccac
ctgattcgctccccttggcggctgcgtcagctgttgagccgttgggatcagttgcaaaac
cagcgccagcaagccggcctgccgcctctggatcggcgcggccaggcccgcagcctcggc
tgccgcgttgagcgcctgcagatggctttacagatgcgcgcagccttgaatctgcgttcc
ttcgatgccgcccctgagggcatcgctttcgagaccgctgatcagcgtcctaccccagaa
gcacgcttggcggaagcggaactggaggagtggatcgaggcgcagagcccggatgatcaa
ctcctcttatgcggcgtgatgcaccaaggcttgagtcagcgccagttggcacgtcaattg
gattggtcgccatgccgcgtgaatcgtcgcctgcagcagctgcgtcagcaggtgctgcag
cagttcaacgcaacaccaccatcgcggccgcggcggcaatggccgtcatcagggcattga
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