Synechococcus sp. RCC307: SynRCC307_1460
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Entry
SynRCC307_1460 CDS
T00523
Name
(GenBank) Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SynRCC307_1460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syr03400
]
SynRCC307_1460
Enzymes [BR:
syr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SynRCC307_1460
DNA repair and recombination proteins [BR:
syr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SynRCC307_1460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAK28363
LinkDB
All DBs
Position
1297581..1298165
Genome browser
AA seq
194 aa
AA seq
DB search
MSSSWPHLSAACHGCERCELATTRHNVVVGRGNPQARVLLIGEAPGQQEDEQGEPFVGRA
GQLLEKLLGEAGLDSRRDLYIANVIKCRPPQNRKPTRTEIERCLPWLYQQLELLDPPLVV
LAGATALQAVLGIKGGISKLRGQWIEQQGRAYLPVFHPSYLLRFGSRAPGAPQELTLADM
QDVRRRLDRKDWPQ
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcctggccccacctcagcgccgcttgccacggctgtgaacgctgcgagctg
gccacaactcggcacaacgtggtcgtggggcgaggcaatccccaggcacgcgtgctgctg
attggtgaggccccaggccaacaggaagacgaacagggtgaaccgttcgttggccgggcc
ggacaactgctggagaagctcttgggggaagccgggcttgatagccgccgcgacctctac
atcgccaatgtaatcaagtgccggccaccccaaaaccgcaagcccacgcgcacagagatc
gagcgctgcttgccttggctgtatcagcaactggagctgctggatccccccctagtggtg
ctagcgggagccacagcactgcaggcggtcttgggcatcaaaggcggcatcagcaaactg
cggggccaatggattgagcagcaagggcgcgcctacctgccggtgtttcatccctcctat
ctgctgcgctttggctcccgcgctccgggcgcgccccaagagctcacgctcgcggacatg
caggatgttcgtcgcagactggatcggaaggactggccgcaatga
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