Synechococcus sp. RCC307: SynRCC307_1485
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Entry
SynRCC307_1485 CDS
T00523
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr03410
Base excision repair
syr03430
Mismatch repair
syr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SynRCC307_1485 (recJ)
03430 Mismatch repair
SynRCC307_1485 (recJ)
03440 Homologous recombination
SynRCC307_1485 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syr03400
]
SynRCC307_1485 (recJ)
DNA repair and recombination proteins [BR:
syr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SynRCC307_1485 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SynRCC307_1485 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SynRCC307_1485 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAK28388
UniProt:
A5GU29
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All DBs
Position
complement(1321204..1323054)
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AA seq
616 aa
AA seq
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MPPLPLPQSLALPPALVAVLQRRGVQSHQELQSLLQPDPAPEAKAHFPDLEIAVQRLLQA
CREGQALAVCGDYDADGMTSTALLVGVLSRLGAKPQAAIPSRQSEGYGLNAAMVERLAEQ
GVKLLVTVDNGISAREALERAEGLGLEVIVTDHHTIPPQRPPLLALLHPALTPPSSPYRG
LAGVGLAYVLAAAVAERLRNPQALRTALDLFCIGTIADMAPLTGVNRRWLQEGLPQLHRS
LLPGLRALAELAGLEDRPIDSQGVGFRLAPRLNAVGRLADPQLAVELLTTADADRALELA
ERCEQLNRQRRELCDGIEAEANALVEADGDQRPAFLLLAQNHWHHGVIGIVAARLVERWG
LPVALLAGEGNGRLRSSVRAPEGFAVDAALQACADLLERFGGHPAAGGFTVQATQVAALH
ERLNGLANDWLAGREHALVVRPEALLPLEQIDRDFLQQLRRLEPFGAANPSPLFWARHCK
VKRQRLLRGGHLLLELAVPTGSLSAIAWRWSGPEPSSPTLDLAFRLKEDHWQGQPRLQLE
LEALRPALHERVTLWRRQRCYQCERQGDALVIRNPEGRELRCQWPQTPGDNSDPVQSHPD
TAELVQHAALALGFVA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
ttgccaccgctgcctctcccccaatcgctcgcgctgcccccggctctggtggcggtcctg
cagcgccgtggggtgcaaagccaccaggagctgcaaagcctgttgcagcccgatccggca
ccggaggccaaggcccactttcccgatcttgaaattgctgtgcagcggctgctgcaggcc
tgtcgtgaaggccaagccttggcggtctgcggcgattacgacgccgatggcatgaccagt
accgccctgttggtgggggtgctgagccgtttgggggccaaaccccaggcggcgattcct
agccggcaaagcgagggctatggcctcaatgccgccatggtggagcgcctggctgagcag
ggcgtcaagttgctggtgaccgtcgacaacggcatcagcgcccgagaagccctggaacgt
gcagaagggttgggcttggaggtgatcgtgaccgatcaccacaccattccgccgcagcgt
ccaccgctcttggctctgctgcatccagccctcacaccgcccagctcgccctaccgcggt
ttggctggcgtgggtttggcctacgtcttggcggctgctgtggccgagcgactgcgcaac
ccccaggcgctgcgcacagctctcgatttgttctgtattggcaccatcgccgacatggcg
ccgctgaccggtgtgaatcgccgctggctgcaagagggcctgccgcaactgcaccgctcg
ctgttgccgggactgcgggccttagcggaactcgccggtctggaggatcgccccatcgac
agccaaggggttggctttcgcttggccccgcgcctcaatgcggtgggtcgcttggccgat
ccacagcttgctgtagagctgctcaccaccgccgatgccgatcgtgctctggagctggcg
gaacgctgtgaacaactgaaccggcagcgacgtgagctctgtgatggcatcgaagcggag
gccaatgcgctggtggaagccgatggtgatcagcggccagcctttcttttattggcccaa
aaccattggcaccacggcgtgattggcatcgtggctgctcgcttggtggagcgctggggt
ctgccggtcgccctgctcgctggggagggcaatggtcggttgcgctcatcggtgcgggcc
cctgagggttttgcggtggatgccgcgttgcaggcctgtgctgatctgttggagcgcttt
ggcggtcaccccgccgccggcggattcaccgttcaggccacccaggtggccgccctgcat
gagcggctcaatggcttggccaatgactggcttgcgggccgggagcatgccctggtggtg
cgccccgaagccttgctgccgctggagcaaatcgaccgtgattttcttcagcaactgcga
cggttggaaccatttggcgctgccaaccccagtcccctcttttgggctcgacactgcaag
gtcaaacggcagcgcttgcttcgcggcggtcacctactgctcgaactggctgtcccgacg
gggtcactgagtgcgattgcctggcgttggagtggtcctgagcccagcagcccgacgctt
gatctggcttttcgcctcaaagaagaccactggcaggggcagcccaggctgcaattggaa
ttggaggccctacgccccgccctgcatgaacgggtcaccctctggcgccggcagcgctgc
tatcagtgcgagcgccagggcgatgccttggtgattcgtaatccagaggggcgcgaattg
cgttgccagtggccccaaacccctggtgacaattccgacccggtccaatctcaccccgat
accgctgagctggtgcagcatgctgctcttgctctcggctttgttgcctga
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