Synechococcus sp. RCC307: SynRCC307_1542
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Entry
SynRCC307_1542 CDS
T00523
Symbol
crtH
Name
(GenBank) Carotenoid isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr00906
Carotenoid biosynthesis
syr01100
Metabolic pathways
syr01110
Biosynthesis of secondary metabolites
Module
syr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SynRCC307_1542 (crtH)
Enzymes [BR:
syr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
SynRCC307_1542 (crtH)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
HI0933_like
FAD_oxidored
Thi4
FAD_binding_2
Pyr_redox_2
FAD_binding_3
GIDA
Lycopene_cycl
Pyr_redox
GMC_oxred_N
GDI
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
CAK28445
UniProt:
A5GU86
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All DBs
Position
1359527..1361074
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AA seq
515 aa
AA seq
DB search
MSSSPDWDVIVIGAGIGGLVTASQLAAKGAKVLVLERYLIPGGSGGSFKRAGYTFDVGAS
MIFGFGQKGHTNLLTRALADVGEHCDTIADPVQLEYHLPGGLNVAVDRNYESFVERLSSL
FPHEAKGIRAFYDTCWQVFRCLDAMPLLSLEDPAYLAKVFFRAPLACLGLARWLPFNVGD
VARQHINDPQLLQFIDMECFCWSVMPADLTPMINAGMVFSDRHAGGINYPKGGVGTIACR
LVSGLERHGGQIRYKARVTRVLMDGSQAVGVELADGETIHARRVVSNATRWDTFSGEGSA
KAPLVDADHTPAREARWRKRYKASPSFLSLHLGIDAALVPSGFHCHHLLLEDWQAMEDEQ
GVIFVSMPSLLDPELAPSGRHILHCFTPSAMEHWQGLGPEAYKAKKQADADRLIQRLETL
LLPGLSGSIHHREVGTPRSHRRFLGRHQGSYGPIPALRLPGLLPMPFNRTGVDGLYCVGD
SCFPGQGLNAVAFSGFACAHRIGADLGLNPWALPQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagcccggattgggacgtgatcgtgatcggcgccgggattggcggcctggtt
accgccagccaactggcagccaaaggggccaaggtgctggtgctggagcgctatttgatt
cctggaggtagcggcggcagtttcaaacgggccggctacaccttcgatgtgggcgcctcc
atgatttttggcttcggccaaaaaggccataccaacctgctgaccagggccctcgccgat
gtgggggagcactgcgacaccatcgctgacccggtgcagctggaatatcacttgccaggc
ggcctgaacgtggccgtcgatcgcaattacgagagctttgtcgaacggctgagcagcctg
tttccccatgaagccaaagggatccgcgccttctatgacacctgttggcaagtgttccgc
tgcctcgatgcgatgccgctgctctcgctcgaggatccggcctatctcgccaaggtgttt
ttcagggctccactggcttgcctagggcttgcccgctggctgccgttcaatgtcggcgat
gtggcccgacaacacatcaacgatccccagctgctccaattcattgacatggagtgcttc
tgctggtcggtgatgccagcagatctcaccccgatgatcaatgccggcatggtgttttcc
gatcgccatgccggcggcatcaactaccccaaaggcggcgttggcacgattgcctgcagg
ttggtgagtggcctcgaacgccacggcggccagatccgctacaaggcccgtgtcacgcgc
gtgctgatggacggcagccaagccgttggcgttgaactcgccgatggcgagacaatccat
gctcgacgcgtggtcagcaatgccacccgttgggacaccttcagtggggaaggttcagcc
aaagcgccgctggtggatgccgatcacacacctgcacgggaggcgcgttggcgcaagcgc
tacaaggcctcgccctcgttcctctcgctgcacctgggaatcgatgccgcattggtgccc
agcggtttccactgccaccacctgctgctggaggactggcaggccatggaagacgagcag
ggagtgatctttgtgtcgatgcccagccttctggatcctgagctggcccccagcggtcgg
cacatcttgcactgcttcacgccttcggcaatggagcactggcaaggcctggggccagag
gcctacaaggccaaaaaacaggcggatgccgaccgcttaatccaacgcctcgagaccttg
ctgttgcctggcctcagtggcagcatccatcaccgcgaagtggggaccccgcgcagccat
cgccgcttccttggccgtcaccaaggcagctatggcccgatcccagcgctgcggctgccc
ggcctgctgccgatgccgttcaaccgcaccggcgtcgatggcctctactgcgttggcgat
tcctgcttcccggggcaagggctcaatgccgtggccttcagtggctttgcttgtgcccat
cggatcggtgctgatctagggctcaatccctgggctttaccccaatga
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