Synechococcus sp. RCC307: SynRCC307_1859
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Entry
SynRCC307_1859 CDS
T00523
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SynRCC307_1859 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syr03019
]
SynRCC307_1859 (groL1)
03110 Chaperones and folding catalysts [BR:
syr03110
]
SynRCC307_1859 (groL1)
03029 Mitochondrial biogenesis [BR:
syr03029
]
SynRCC307_1859 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syr04147
]
SynRCC307_1859 (groL1)
Enzymes [BR:
syr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SynRCC307_1859 (groL1)
Messenger RNA biogenesis [BR:
syr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SynRCC307_1859 (groL1)
Chaperones and folding catalysts [BR:
syr03110
]
Heat shock proteins
HSP60 / Chaperonin
SynRCC307_1859 (groL1)
Mitochondrial biogenesis [BR:
syr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SynRCC307_1859 (groL1)
Exosome [BR:
syr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SynRCC307_1859 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
SynRCC307_1859 (groL1)
Exosomal proteins of breast cancer cells
SynRCC307_1859 (groL1)
Exosomal proteins of colorectal cancer cells
SynRCC307_1859 (groL1)
Exosomal proteins of bladder cancer cells
SynRCC307_1859 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAK28762
UniProt:
A5GV53
LinkDB
All DBs
Position
complement(1618009..1619652)
Genome browser
AA seq
547 aa
AA seq
DB search
MAKRIIYNEQARRALEKGIDILTESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVSLIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKRGID
QAAVFLVSKIEENAKPITDNNSIAQVGAISAGNDDEVGKMIADAMEKVGKEGVISLEEGK
SMTTELEVTEGMRFDKGYISPYFATDTDRMEAVLEEPYILLTDKKIGLVQDLVPVLEAIA
RTGKPLLIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTAGQLI
TEDAGLKIENAKIEMLGTARRITINKDTTTIVAEGNEVAVKARCEQIRKQMDETESTYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENVRHKPFSEGFNA
ASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECIVVDLPEKKEAAPAGGGMGGG
MGGDFDY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcatcatttacaacgagcaggctcgccgcgctcttgaaaaaggcatcgac
atcctcaccgagtcggttgctgtcaccctcggccccaaaggccgcaacgtggtgctcgag
aagaagttcggagctcctcagatcattaacgacggcgtcaccatcgccaaggagatcgaa
ctcgaggatcacatcgagaacaccggcgtttccctgatccgtcaggccgcctccaaaacc
aacgatgccgctggtgacggcaccaccaccgccaccgtcctggctcacgccatggtcaag
gctggtctgcgcaacgtggctgctggcgcgaatgccatctccctgaagcgcggcattgac
caggccgctgtgttcctcgtgagcaagatcgaggagaacgccaagccgatcaccgacaac
aactcgattgcccaggtgggcgccatctccgccggtaacgacgacgaagtcggcaagatg
atcgctgacgccatggagaaggtcggcaaagagggcgtgatctccctggaagaaggcaag
tccatgaccaccgaactggaggtcaccgagggcatgcgctttgacaagggctacatctcc
ccttatttcgcgaccgacaccgaccgcatggaagcggtgctcgaagagccctacatcctg
ctgaccgacaagaagatcggtttggttcaggacctggtgcccgtgctggaggccatcgcc
cgcaccggcaagcctctgctgatcattgccgaggacatcgagaaggaagccctggccacc
ttggtggtcaaccgcctgcgcggcgttctgaatgtggctgccgtcaaggcccccggcttc
ggcgatcgccgcaaggccatgctcgaagacatggctgtgctgacggctggtcagctgatc
actgaggacgctggcctcaagatcgaaaacgccaagatcgagatgctgggcaccgcccgc
cgcatcacgatcaataaggacaccaccaccatcgttgccgaaggcaatgaggtggccgtg
aaggcccgctgcgaacagatccgcaagcagatggacgaaaccgagtccacctacgacaag
gagaagctgcaggagcgcctcgccaagctggctggtggcgtggctgtggtgaaggtgggt
gcggccaccgaaaccgagatgaaggacaagaagctgcgcctcgaggacgccatcaacgcc
accaaggcggctgttgaagaaggcatcgtccctggtggcggcaccaccctggctcacctg
gctcctgctctgaccgagtgggccaaccagaacctcagtggtgaagagctgattggcgcc
aacatcgtggctcaggccctcgatgctccccttaagcgcatcgctgaaaacgccggtgcc
aacggctccgtcgtggctgagaacgtgcgccataagcccttcagtgagggcttcaatgcc
gcctcgaacgagtacgtcgacatgctggctgccggcatcatcgaccccgccaaggtgacc
cgctctggcctgcaaaatgccgcgtccatcgctggcatggtgctgaccaccgagtgcatc
gtggttgatcttcctgagaagaaggaagcagctcctgccggtggcggcatgggcggcggc
atgggcggcgacttcgactattga
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