Synechococcus sp. RCC307: SynRCC307_2039
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Entry
SynRCC307_2039 CDS
T00523
Symbol
mpeD
Name
(GenBank) Phycobilisome linker polypeptide, C-phycoerythrin class I and II-associated
KO
K05379
phycoerythrin-associated linker protein
Organism
syr
Synechococcus sp. RCC307
Pathway
syr00196
Photosynthesis - antenna proteins
syr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SynRCC307_2039 (mpeD)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syr00194
]
SynRCC307_2039 (mpeD)
Photosynthesis proteins [BR:
syr00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycoerythrin (PE)
SynRCC307_2039 (mpeD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
DUF4214
Motif
Other DBs
NCBI-ProteinID:
CAK28942
UniProt:
A5GVN3
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Position
1767560..1769200
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AA seq
546 aa
AA seq
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MATQSSGFGATTKWSSPVSFQRKGQAKDKPALTNGEFLKQSCDQMKIGVGPRSHADCPHR
VTAECYSPDDSAALTEAINASYRQVFGNAHVMDFERCTELEAQLCNGDLDVRNFVRGLAK
SSFYKSRFFSSVAPQRGIELNFKHLLGRAPHSQAEVSGKIAVLAEHGHDAVIDSIVDSAE
YLEVFGGDVVPYARAWSSPADLATSAFSLLAALQKNFAGSDSARGGSSALMRSLGSNTAP
PISRSTEVAGYMPSSTSKLGRFSSKEPGVTSGRDTAPMRGDVYVSFGLAQREQETFQRCP
GDSPDQVNALIRSTYRQVMGNPHLMEFERSMSAESKYQDGYLSTREFVRAIGLSAEYKKR
FFETNAPYRFIELNFKHFLGRAPQSQAEISEHTKILAEGGYEAEISSYVDSEEYQSTFGE
DTVPFARILSENGRSQVGFNRHLSLAEGFAASDTVLTGSSLVTSVATGMAPSGWTTTSSR
INRTGTQSGAPDPTKKRFRIVVAAQAARSRQRTANSTYLVSGKDMSSQMKYIHARGGKIV
SITEVM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaatcctccggtttcggcgccaccaccaagtggagcagccccgtcagcttc
caacgcaaagggcaagccaaggacaagccggcactcaccaacggtgagtttctgaagcag
tcctgcgatcagatgaagatcggcgtgggtccccgcagccatgcggactgcccccatcgt
gtgaccgctgagtgctacagccctgacgattcagcagctcttactgaagcgattaacgct
tcctaccgccaggtgtttggcaatgctcatgtcatggacttcgagcgctgcaccgaactg
gaagcccagctttgcaatggtgacctggacgtccgcaactttgttcggggtctggccaag
tcaagcttctacaagagccgctttttctcaagcgttgccccccaacgcggcatcgaactg
aacttcaagcacctgctgggacgcgcgccccattctcaggctgaagtgtccggcaagatt
gcagtgcttgctgagcacggccacgacgctgttatcgacagcatcgttgactcagctgag
tatctcgaagttttcggcggcgatgttgttccctacgcccgcgcctggagctcaccagct
gatctagccacctctgccttctctttgctggctgcactccagaaaaactttgcaggcagt
gatagcgctcgtggcggcagcagcgccctgatgcgcagccttggcagcaacacagctcct
ccaatcagccgcagcaccgaagtggctggctatatgccgtccagcacctccaagctgggg
cgtttcagctcgaaagagcccggtgtcaccagtggtcgcgacaccgctccgatgcgcggt
gacgtgtatgtctccttcggcttggcacaacgcgagcaagagaccttccaacgctgccct
ggcgacagccctgatcaggtgaatgccctgattcgctcaacttaccgccaagtgatgggc
aacccccacctgatggaattcgagcgcagtatgtcagctgagagcaagtatcaagacgga
tacctcagcacccgtgaattcgtgcgggccattggcctctccgccgaatacaagaagcgt
ttcttcgagaccaacgctccttatcgcttcatcgagctgaacttcaagcacttcctgggg
cgtgcccctcagtcccaagctgagatcagtgagcacaccaagatcctggctgaaggcggt
tacgaagcagagatcagcagctacgtcgacagcgaggagtatcaatccaccttcggcgag
gacactgttcccttcgcccgcatcctttcggagaacggtcgctcccaggttggctttaac
cgccacctgagcctggctgaaggctttgccgccagcgacacggtgctcacaggctcttcg
ctggtgacctcggtcgccaccggcatggcccccagcggctggaccaccaccagtagccgg
atcaaccgcactggcacccagtcgggtgcaccagatcccaccaaaaagcgtttccgcatt
gtggtggcagcgcaagccgcacgttcccgtcagcgcaccgccaactccacctatctcgtg
tccggtaaggacatgagttcccagatgaagtacatccacgcacgcggcggcaagatcgtc
tccattactgaggtgatgtaa
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