Synechococcus sp. RCC307: SynRCC307_2234
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Entry
SynRCC307_2234 CDS
T00523
Name
(GenBank) ABC transporter, ATP binding component, possibly for oligopeptides
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
syr
Synechococcus sp. RCC307
Pathway
syr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SynRCC307_2234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syr02000
]
SynRCC307_2234
Transporters [BR:
syr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SynRCC307_2234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
SMC_N
nSTAND1
AAA
Mg_chelatase
AAA_29
AAA_18
RsgA_GTPase
TniB
AAA_33
Rad17
AAA_25
AAA_16
AAA_5
AAA_28
RNA_helicase
AAA_17
MMR_HSR1
Cytidylate_kin
NACHT
ATP-synt_ab
AAA_23
AAA_14
ATP_bind_1
Adeno_IVa2
tRNA_lig_kinase
Motif
Other DBs
NCBI-ProteinID:
CAK29137
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Position
complement(1940151..1941779)
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AA seq
542 aa
AA seq
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MVFSGEQNPNRGQQLAMELAPVLQLEDLVVAYPGSADPTLDGLTLSLQRGERLALVGPSG
CGKSTVARAVLGLLPEGSRSQGRLELMGSDPRRLRRGALNRLRGEAVGLVFQDPMTRLNP
LITIGDHLRDTLSAHGAQAARAEELLQRVGIGPERMNSYPHQFSGGMRQRVAIALAMALQ
PPLVIADEPTTSLDVAVAGQVMAELTGLCQEAGSALLLITHDLAMAGRWCQRMAVMQDGR
LLEEASASEVLLQPQQPLTQRLVAAARQREGGATPQAPATPVVLELHQLRCWHRLGGWPW
QPQWLRSVDGISLRLHAGETLGIVGPSGCGKSTLCRALMGLNPVRGGEVMLQGRDLRRLQ
GQDLRQARQRLQMVFQDPLACLNPAMTVIDAVADPLLIHGLASPGQAREQARTVLASVGL
DASLAQRLPRQLSGGQQQRVAIARALVLQPAVLLCDESVSMLDAEVQAEVLQLLRQLQQQ
LGVAILFVTHDLGVASGFCHRVVVLDQGRIVEEGPGDVMLQAPAAAITRELVEACPRLPQ
PK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtattcagcggcgagcagaatcccaaccgtggtcagcagctcgccatggagttagcc
cctgtgctgcagctagaggatctggtggtggcctacccaggctccgctgatcccaccctc
gatgggctgaccttgagcctccagcgcggtgagcggttggccttggtggggccctccggt
tgtggcaaaagcaccgttgccagggccgttttgggcttgttgccggaaggcagccgcagc
caggggcgcctggaattgatgggcagtgatccccggcgcctgcggcgcggggcgttgaac
cgtctgcggggtgaggcagttggtctggtcttccaagacccgatgacccgcctcaatccg
ctgatcaccattggagatcacctgcgcgacaccctttcggcccatggggcccaggcggcg
cgggccgaggagctgctgcagcgcgtgggcattggcccagagcggatgaacagttatccg
catcaattcagtggtggcatgcgccagcgggtggcgattgccttggccatggccttgcaa
ccgccgctggtgatcgctgatgagcccaccaccagcctcgatgtggcggtggctggccag
gtgatggctgagctcacggggctgtgccaagaggcgggtagtgcgctgttgctgatcacc
cacgatttggccatggcgggccgctggtgtcagcgcatggccgtgatgcaggacggtcgt
ttgctggaggaggcatcggcttcagaggtgttgcttcagccgcagcaaccgctgacccaa
cgcttggtggcagcggcccggcaacgggagggaggggcgacccctcaagctccagccaca
ccggtggtgctggagctgcatcaactgcgctgttggcatcgcctcggtggttggccctgg
cagccgcagtggttgcgctcggttgatgggatcagcctgcgccttcatgccggggaaacc
ctgggcatcgttggtccatcggggtgcggcaagagcaccctttgccgcgccttgatgggg
ctcaaccctgtccgtggtggtgaggtgatgctgcagggcagggatttgcggcgcttgcag
gggcaggacttacgccaggcccgccagcggttgcagatggtgtttcaagacccgctggct
tgcctcaatccagccatgaccgtgatcgatgcggtggccgatccgttgttgatccatggc
ttggcatcaccgggccaagcgcgcgagcaggcccgcacggtgttggcgtcggtggggctc
gatgcgtccttggcgcaacgcctgccccggcagctctccggtggtcagcagcagcgggtc
gcgattgctcgggcgttggtgctgcaaccggctgtgctgctttgcgatgaatcggtgagc
atgctcgatgccgaggtgcaggccgaagtgctgcaactgctgcgccaactgcagcaacag
ctcggtgttgcgatcttgtttgtcacccatgacctcggggtggccagtggtttttgtcac
cgcgtcgtggtgctggatcagggccgcatcgtggaagagggacctggtgatgtgatgttg
caggcaccagcagcggccatcacccgtgaattggtggaggcctgtccgcgcttgccgcag
cccaagtga
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