Synechococcus sp. RCC307: SynRCC307_2381
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Entry
SynRCC307_2381 CDS
T00523
Symbol
hepA
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
syr
Synechococcus sp. RCC307
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAK29284
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All DBs
Position
2075338..2078388
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AA seq
1016 aa
AA seq
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MSLLHAVWLPNPGAPHLALWADTWRVAKPRKLDGLEAPLLHPLALEAGDLKAWLEEIDRL
PAEAQAIEVQLTLPSRSNGLPLMAGEAIPKAVQWWPWRVPALAMAPADAASWLGQLPLAS
SPAELGDDLSWWAHLQRWALSLAARGRWLPVVRRLEPGHVQASWQPLLNHEEDRRRLEDL
ASQMPLVVSAADTPGALGCRRPSAKRLQVAQIAGALLDGQLRKGFQPSAEGLDPLLAGWQ
QALGPGDGILALSDDDSARLISATSRWRETVAGQVAPARALLELDTPPQGSELWPLRFGL
QAEADANLRQSATAVWNAGDGVLQLGEIQVEQPGELLLEGLGRALVAFEPLARGLDAAAP
EAMELAPAEAFVLVRTAAAKLRDVGVGVVLPPSLSGGLASRLGLAIKAELPEQGRGFSLG
ENLEWSWQLMIGGVTLTLKELERLAGKRSPLVQHKGAWIELRPSDLKNAEKFCAADPPLS
LDDALRLTASEGDTLMRMPVHRFEAGPRLQAVLEQYHQQKAPDPLAAPEGFEGQLRPYQE
RGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQHLKAEQELKRPVLLVAPTSVLTNWK
REAAQFTPELQVLEHYGPKRASTDAALKKALKSVDLVLTSYGLLQRDSELLGNFDWQGLV
IDEAQAIKNPGSKQSKAARSLARPSRQSRFRIALTGTPVENRVSELWALMDFLNPRVLGE
EDFFRQRYRLPIERYGDTSSLKDLKARVGPFILRRLKSDKSIIADLPEKLELAEWVELSG
EQAKLYRKTVDNTLEAIQRAPLGQRHGQVLGLLTKLKQICNHPALLLGEEEVGTDFASRS
AKLQRLEEILEEVMEAGDRALLFTQFASWGHLLKTHLQQRWRQEVPFLHGGSSKNERQAM
VDRFQQDPRGPQLFLLSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATDRAYRIGQTQR
VLVHKFITTGSLEEKIDRMIQEKASLAADIVGSGEEWLGGLELSQLRDLVSLEATP
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacgccgtttggctgcccaaccccggagcgccccatttggccctctgg
gcggatacctggcgcgtggccaaaccacgcaaattggacggcctcgaagcgccactgctg
caccccctggcgctggaggcgggcgacctcaaggcttggctggaagagatcgatcggttg
ccggctgaggcgcaagccatcgaagtgcagctgaccctgcccagccgcagcaatggcctg
ccgctgatggctggtgaagcgatcccgaaagcagtgcagtggtggccctggcgcgtgccc
gccctggccatggccccggcggatgccgccagctggctggggcagctgcccctagccagc
agcccagccgaactcggtgatgacctgagctggtgggcccatctgcagcgctgggccttg
agcttggcggcccgcggccgctggttgccggtagtgcggcggctggaacccggccatgtg
caggccagctggcagcccctgctcaaccacgaagaagaccgccgccgcctggaggatctc
gccagccagatgccgctggtggtcagcgcagcggacaccccaggcgccctgggctgccgc
cggcccagcgccaaacgtttgcaagtggcccaaatcgctggggccctactcgatggccaa
ctgcgcaaaggctttcaaccctctgcggagggattggatccactgctggcgggctggcaa
caagccctggggccaggcgatggaatcctggctctcagcgacgacgacagcgcccggctg
attagtgccacctcccgctggcgcgagaccgtggcgggccaagtggcaccggcgcgggcc
ctgctggagctcgacacaccaccccagggcagtgagctctggcccttgcgctttggcctg
caagccgaagccgacgccaacctgcgccagagcgccacagctgtttggaatgccggtgat
ggggtgctgcaactgggtgaaatccaggtggagcagcccggtgaactgctcttggaaggc
ctgggccgtgccctggtggcctttgagcccctggcccgcgggctggatgcagcagcccca
gaagcgatggagctggcaccagcggaagcgtttgtgttggtgcgcactgccgcggccaag
ctgcgggatgtgggggttggggtggtgttgccccccagcctcagtgggggcctcgccagc
cggctgggccttgcgatcaaggccgagctgcctgaacaaggccgtggcttcagcctcggc
gaaaaccttgagtggtcgtggcagctgatgatcggcggcgtcaccttgacgctcaaggag
ctcgaacggctagccggtaagcgcagccccttggtgcaacacaaaggcgcctggatcgag
ctgcggcccagcgatctcaaaaacgccgagaagttctgcgcggctgatccaccgctgagc
ctcgatgacgccttaaggctcaccgccagcgaaggcgacacgctgatgcgcatgcctgtg
caccgctttgaagcgggccccaggctgcaggcggtgctggagcaataccaccagcaaaaa
gcacccgatccgctggcggcaccggaaggctttgaaggccaattgcggccctatcaagag
cgcggcctcggctggttggccttcctgcaccgctttgatcaaggcgcctgcctggccgat
gacatgggcctgggcaaaacgatccagctgctggccttcctgcaacacctcaaggccgag
caagaactcaaacgcccggtgctactggtggcgcccacctcagtgctgacgaactggaag
cgcgaggccgcccagttcaccccggagctgcaggtgctggagcactacggccccaaacgc
gccagcaccgatgcagccctgaaaaaggcgctcaagagcgttgatctggtgctcaccagc
tacgggctgctgcaacgggatagcgaactgctgggcaacttcgattggcaaggactggtg
atcgatgaagcccaagcgatcaaaaaccctggctccaagcagagcaaagcggcccgcagc
ttggcgcggcccagccgccagagccgcttccgcatcgccctgaccggcacacccgtggag
aaccgggtcagtgagctgtgggccctgatggatttcctcaacccgcgggtgctgggcgaa
gaggacttcttccgccagcgctaccgcttaccgattgagcgctatggcgatacctcctcg
ctcaaggacctcaaagcccgcgtcggccccttcatcctcaggcgcctgaaaagcgacaaa
tcgatcattgccgatctgcctgaaaagctggagctcgccgaatgggtggagctcagcggc
gagcaggccaagctgtatcgcaagactgtcgacaacaccctggaggcgatccagcgggca
ccgctcggccaacgccatggccaagtgctgggactgctcaccaagctcaagcagatttgc
aaccacccggcgctgctgctgggggaagaggaggtgggcaccgatttcgccagccgttcg
gcgaagttgcaacggcttgaggagattctcgaagaagtgatggaagcaggggatcgcgcc
ctgctgttcacccaattcgccagctggggccacctactcaaaacccatctgcagcagcgc
tggcgccaggaggtgcccttcttgcacgggggcagcagtaagaacgaacgccaagcgatg
gtggatcgcttccagcaggatccccgcgggccgcagctgttcttgctttcgctcaaagcc
ggcggtgtggggctcaacctcacccgcgccagccatgtgttccacatcgatcgctggtgg
aatccagctgttgagaaccaagccaccgaccgggcttatcgcattggccaaacccagcgg
gtgctggtgcacaaattcatcaccaccggctcgctcgaggaaaaaatcgatcgcatgatt
caggagaaggcctccctggccgctgacatcgtgggcagtggtgaggaatggctgggcggg
ctggagctcagccaattgcgcgatctcgtatccctggaggccacaccatga
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