Synechocystis sp. PCC 6803 PCC-N: SYNPCCN_0007
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Entry
SYNPCCN_0007 CDS
T01778
Symbol
rfbD
Name
(GenBank) GDP-D-mannose dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
sys
Synechocystis sp. PCC 6803 PCC-N
Pathway
sys00051
Fructose and mannose metabolism
sys00541
Biosynthesis of various nucleotide sugars
sys01100
Metabolic pathways
sys01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
SYNPCCN_0007 (rfbD)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SYNPCCN_0007 (rfbD)
Enzymes [BR:
sys01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
SYNPCCN_0007 (rfbD)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
BAL30924
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All DBs
Position
complement(5534..6622)
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AA seq
362 aa
AA seq
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MSKSKVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKL
RLHYGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIR
DYQHRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYD
LFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRA
MWAMLQQEQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDERYLRPAEVDLLIGD
PAKTKAQLGWEPSVTFTELVHLMVEADLAVLGLTSPNQSGRIKELMAQDMAFIRSQNGHA
VD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtctaaagttgttttgctgacaggcatcacggggcaagatggctcctatctg
agtgaattgttgttggaaaagggctaccaagtccatggcatcattcgccgaacttctacc
tttaacactgaccgcattgatcatctttatgttgatccccatgatcttgaggcgaaactc
cgacttcattatggtgatctgaccgacggcaccaccctgcgccgcattttagaagatgtc
aaaccgacggagatttacaatctgggggcccaatcccacgtgcgggtgagctttgattct
ccggaatacactgtagattcagtggccatggggacgctacgactattggaagcgattcgg
gattatcaacatcgcaccggcatccaagtaaggttctatcaagccggttcttcggaaatg
ttcggcaaagtgcaggagattccccaaaaggaaaccacccccttttatccccgcagtccc
tacgcctgtgccaaggtttatggccattggcaaacggtgaactatcgggaatcctatgac
ttattcgcctgtaacggcattttgttcaaccacgaatccccccgccggggagaaaccttt
gtaaccaggaaaattactagggcgatcgccagaattgtggccggcacccaaaagaaattg
tatttaggcaatatcgattccaagcgggattggggctatgccaaggactatgtacgggcc
atgtgggccatgttgcaacaggaacagcccgatgactatgtggtggccacgggggaaacc
cacgaagtgaaggaatttttagaaattgcctttggttacgtcaacctcaactggcagaac
tatgtggcctttgatgagcgctatttacgccccgctgaagtagatttattaatcggcgat
ccggcgaaaaccaaagcccaattgggctgggaaccctcggttacctttacggaattagtt
catttaatggtggaggcagacttagcagtccttggtttaacttctcccaaccagagtgga
cgaatcaaggagctcatggcccaggatatggccttcattcggagccaaaatggccatgcc
gtcgattaa
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