Synechocystis sp. PCC 6803 PCC-N: SYNPCCN_1987
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Entry
SYNPCCN_1987 CDS
T01778
Symbol
clpB
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sys
Synechocystis sp. PCC 6803 PCC-N
Brite
KEGG Orthology (KO) [BR:
sys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sys03110
]
SYNPCCN_1987 (clpB)
Chaperones and folding catalysts [BR:
sys03110
]
Heat shock proteins
HSP100
SYNPCCN_1987 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
Mg_chelatase
IstB_IS21
AAA_14
ATPase_2
AAA_18
TniB
RuvB_N
AAA_7
Zeta_toxin
NBD_SMAX1
ABC_tran
NACHT
AAA_23
T2SSE
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
BAL32904
LinkDB
All DBs
Position
2192220..2194916
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AA seq
898 aa
AA seq
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MQPTDPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDG
EGLRQQLEIFTNRQPKQAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAED
DRVGRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQGKLD
PVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLI
SLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAG
NLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEK
YEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVELEDID
RRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQML
EEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNT
LLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIR
RARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSR
LIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGR
VVDFRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFH
TLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQ
LENPIATKILENTFVAGDKILIDCVDGQLIFDKEIEPTTLPEEPEENITAVEVEVLSS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctactgatccaaccaaatttactgaacaagcctgggacgccattgttaaatcc
caagaagtagcccgtcgttataagaacacaaatttggaagtagagcatattctgctggcg
ttgttggagcaggatatgggtttggcggcaaggattttccagcgggcggcggtggatggc
gagggactacggcaacagttggaaattttcaccaaccggcaacccaagcaggcttatgta
gaacaactttacctggggcgtagtttggatgtgatgctagaccgggccgatgccgcccgt
agtagctgggaagataaattcatttccgttgaacatttactggtggggtttgcagaggac
gaccgggtggggcgcaaaaccctccgcgcgtttaaccttgacccccaggatttagagttg
gccatcaaagcgattcgaggttcccaaaaggtgacggagccaaatcaagaagaaaaatat
gaagcgttggataaatacggacgagatctgacggagcaggcccgccagggtaagctagac
ccagtgatcggtcgagatgaggaaattcgtcgagttattcaagtactctctcggcgttcc
aaaaataaccctgtcctgatcggtgaaccgggggtgggcaaaacggcgatcgccgaaggt
ttggcccaacggattatcaatggcgacgtaccagaatcattaaaaaatcggcagttaatt
tccctggatatgggcagtttaattgccggggctaaatatcggggggaatttgaagaaaga
ctgcggtcagtgatgaaggaagtgaccaattccgatgggcaaatcatcttattcattgat
gaagtccataccgtagtgggagccggtggtcgcgaaggttctgggtccatggatgcaggg
aatttgctcaagcccatgttagcccggggggagctgcggtgcattggggccaccacattg
gatgaataccgcaaaaacatcgaaaaagatcctgctttagaaagaagatttcaacaggtt
tacgtcaagcaacctagcgtggatgatacgatttccatcctgcggggtttgaaggaaaaa
tatgaagtacaccatggggtcaaaatcaccgactccgccctagtagcagcagctaccctt
tcccatcgctatatccaagatcgatttttgcccgacaaggcgattgatttagtggacgaa
gcagccgcccgattaaaaatggaaattacttccaaaccggtggaattagaggatattgac
cgacgcttaatgcaactacaaatggaaaaactttccctagaaggggaagaaaaacgtcct
ggtttaggagctgacaaatcttccaaagaaagactagaaaaaattcagcaggaaattact
gaattagagggtcagcaacaggaattatccggtcaatggctgtcggaaaaacagatgctg
gaagaaattaacaccctcaaagaaaaggagcaagagctaagacttcaggtagaaaaagct
gagcgggccactgattgggaaaaggccgccaaaattaagtacggagagttagaagtcctc
caacatgacattgaagaaaaagaaagtaaattactagaaattcaaggctccggtaatact
cttttgcgggaacaggtaacggaatcggacattgccgaaattgtcgccggttggacgggc
atccccatgaaccgtctcatggaaacggaacggcaaaaattattgcaattggaaggtcac
ctccatcagcgagtgatcggtcagaaggaggcagtagcggcagtttctgcggccatacgt
cgggctagggccggcatgaaggaccccagtcgccccattggctcttttctgtttatgggg
cccacgggggtaggtaaaacggaattggctcgggccttggccgggtttctgtttgacagc
gaagaagccatggtgcggattgatatgtccgaatatatggaaaaacacgccgtttcccgt
ttaattggagctccccccggttacgtgggctacgaggaagggggacaattatcggaagca
gtgcgccgtcgtccctattccgttgtgttgttggacgaagtggaaaaagcccatttagac
gtgtttaatattttgctgcaggtcttggatgatggccgcattaccgattcccaggggcgg
gtggtggattttcgcaacaccattatcgtcatgaccagtaacattggcagtgaccatatt
ctcagcctttccgccgatgatgccgactacgacaaaatgcagaaacaggtattacaatcc
ctgcgcaaacatttccgtccggaatttctcaaccgtattgatgatctaattattttccat
acgttgaaacgggatgagttgcgtcgcattgtcgtcctacaaattaaacgcatcgagaag
ttattagacgagcaaaaaatcacgctttctctttccgatgctgccctggatcacatcgtc
agtgctggttacgatcccacctacggagcaagacctttaaaacgtgctattcaacgacag
ttggaaaatcctattgccactaaaatcttagaaaatactttcgttgcaggggacaaaatt
ctcattgattgtgtggatggtcagttaatctttgataaagaaatagagcccacaacatta
ccagaagagccagaagaaaatatcacagcggtggaagtcgaggttctttcttcataa
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