Synechocystis sp. PCC 6803 GT-I: SYNGTI_1181
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Entry
SYNGTI_1181 CDS
T01777
Symbol
rpoD2-V
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
syt
Synechocystis sp. PCC 6803 GT-I
Brite
KEGG Orthology (KO) [BR:
syt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SYNGTI_1181 (rpoD2-V)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syt03021
]
SYNGTI_1181 (rpoD2-V)
Transcription machinery [BR:
syt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SYNGTI_1181 (rpoD2-V)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BAL28928
LinkDB
All DBs
Position
complement(1300590..1301699)
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AA seq
369 aa
AA seq
DB search
MSDMSSLSTPNTSAVDQWQALDGLADGQAIANDDPPAIEVTLGDGQQGSFNKAVSEDTVG
AFFKEMARYPLLSAAEEVELARQIRLLVSAEDVRQQLTQQLERTPSLQEWGQALEFPQVR
QFEIWLYQLRAAKRRMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRAAEKFDPDK
GYKFSTYAYWWIRQAITRTIANDARTIRLPIHVVEKLNKIKKAQRSLKQELKRNPNEGEL
AAALDITPAQLRQLLQLRRQSLSLNHRVGKGEDTELVDLLEDQQLQLPEDLMNESMLRRE
IVEVLAEVLTEREMEVICLRYGIASHQSYTLEEVGNMFNLSRERVRQIQSKAMRKLRRPQ
VARRLKGWL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgtcttccctctccacccccaacaccagtgccgttgaccaatggcaggct
ttggatggcctcgctgatggccaggcgatcgccaatgatgaccctccggcgatcgaagtc
accctgggagatggccaacaaggaagttttaataaagcagtaagtgaagacactgtgggg
gctttttttaaagaaatggcccgctatcccctcctgagtgccgccgaagaagtggaattg
gctagacaaatccgattgttggtcagcgcagaagatgttagacaacaactcacccaacaa
ctggaacgaacgccttccctccaggagtgggggcaagccctagaatttccccaggtcaga
caatttgagatttggctttatcaactgcgggctgccaaacgacggatgatccgctccaat
ctccgcctagtggtttccattgccaagcgttacctcaaccgtggtgttcccttcctcgac
ctgatccaagaaggggcgatcggtctcaaccgagccgcagaaaagtttgatcccgataaa
ggttataaattttccacctatgcctactggtggatccgccaggccatcacccgcaccatt
gccaatgacgctcgcaccattcgtttgcccatccatgtggtggaaaagctcaacaaaatc
aagaaagcccaacgcagtctcaagcaggaattgaagcgcaatcccaacgaaggggaattg
gccgctgctttggacattacccctgcccaactaagacaattactgcaattgcgtcgtcag
tccctgtccttaaaccatcgggtaggcaaaggggaagacaccgagttggtagatctacta
gaagatcaacaactgcagttgccggaggatttgatgaatgaatccatgttgcggcgggaa
attgtcgaagtattggccgaggtactaacggaacgggaaatggaagtgatttgtctgcgc
tacggcattgccagccaccaaagttacacccttgaggaagtgggcaatatgtttaatctt
tcccgggaaagggttagacaaatccaaagcaaagccatgcggaaactccgtcgtccccaa
gtggcccgccgcctcaaaggttggttatag
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