Synechocystis sp. PCC 6803 GT-I: SYNGTI_2022
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Entry
SYNGTI_2022 CDS
T01777
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
syt
Synechocystis sp. PCC 6803 GT-I
Pathway
syt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYNGTI_2022 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syt03400
]
SYNGTI_2022 (xthA)
Enzymes [BR:
syt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SYNGTI_2022 (xthA)
DNA repair and recombination proteins [BR:
syt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SYNGTI_2022 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Aa-Ago_N
Motif
Other DBs
NCBI-ProteinID:
BAL29769
LinkDB
All DBs
Position
complement(2230754..2231551)
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AA seq
265 aa
AA seq
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MDIASWNVNSVRSRQQHILDWLGTNPVDVLCLQETKVVDEDFPRQPFEEAGYHCHISGQK
SYNGVAIFSREPLQDVKIGFAALVEPALTGDLDEQKRVISGVYDGVRIVNLYVPNGSALD
SEKYLYKLRWLNLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAME
REALTEVLAIANLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDHHYLTPQLYDQAQK
CWIDREPRGWEKPSDHAPVVVTINN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgccagttggaacgttaattccgtccgcagtcgtcagcaacatatcctcgat
tggttgggcacaaaccctgttgatgtactttgtttgcaagaaactaaggtggtggatgaa
gattttccccggcaaccgtttgaagaggcgggctaccattgccatatttctgggcaaaag
tcctataacggcgtggccattttcagtcgggaaccattgcaagacgtgaaaatcggtttt
gcggccctagtggagccagccttgacgggggatttggatgaacaaaaacgagtgatcagt
ggcgtttatgacggtgtgcggatcgttaatctctacgttcccaatggatctgccctcgac
agtgaaaagtatttgtataaattgcggtggttaaacttactgcagacctatctggagcaa
ctgcgccgtagtgacaccccagaatttttggtctgtggagatttcaacattgccccagaa
gaccgggatatccatgacccagtgggccgggagaatcatattatggccactgccatggaa
cgggaagctttaacggaagtgttggcgatcgccaatttgcaggatgctttccgtaaattt
accgaagaaacgggccattacagttggtgggattatcgcactaggggctttagtcgcaac
cgggggtggcgcattgaccaccattatctaactccccaactctacgaccaggcccaaaaa
tgttggatagatagggaacccaggggttgggaaaaacccagtgaccatgctccggtggtg
gtaactatcaacaattaa
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