Synechocystis sp. PCC 6803 GT-I: SYNGTI_3107
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Entry
SYNGTI_3107 CDS
T01777
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syt
Synechocystis sp. PCC 6803 GT-I
Brite
KEGG Orthology (KO) [BR:
syt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syt03016
]
SYNGTI_3107 (truB)
Enzymes [BR:
syt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SYNGTI_3107 (truB)
Transfer RNA biogenesis [BR:
syt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYNGTI_3107 (truB)
Prokaryotic type
SYNGTI_3107 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAL30854
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All DBs
Position
3504645..3505535
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AA seq
296 aa
AA seq
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MFGFLNLHKPLHLTSHDCVAKVRRLLRQKRVGHGGTLDPLAEGVLPLAVGSATRLLPYLP
GAKQYQALIRFGVRTDSDDLAGEVLESKNVSYLTLAAVEQILPTFLGEIEQIPPQYSAIQ
VNGKRLYELARAGIPQAVPSRMVTINDLKILGWRSGNQPELDLQVTCGEGTYIRALARDL
GDRLGTGATLAGLVRQQSGGMALDNSVGLTALEKIVAEEEHIPLIPPQEALSHLPTVQLN
SELEKRWFHGQRLLLPDLPVGVVLITSELGPVKCLGVALVTPEDHGTVLRPKVVLN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtttcctcaatctccataaacctctgcacctcacttcccatgattgtgtggcc
aaggtgcgtcgtctattaaggcaaaaacgggtggggcacggaggcaccctagatcctttg
gcggagggagtattgcccctggcggtggggtcggctacccgtttactgccctacttacct
ggggcaaagcaatatcaagcccttattcgctttggggtacgtaccgacagcgatgaccta
gctggggaggtattagagagtaaaaatgttagttatttaacccttgccgccgttgaacag
attttaccgacttttttgggggaaattgagcaaattccccctcaatacagcgctattcag
gttaatggtaagcgtttgtatgaattggccagggctggcattccccaagcagtgcccagt
cgcatggtgactattaatgatttgaaaatactcggttggcgatcggggaatcagccggaa
ttagatttacaagttacctgtggggaaggaacctacattcgagccttagccagggacctt
ggcgatcgcctgggaacaggggcaacgttggcgggcttggtacggcaacagagtgggggc
atggccctggataatagcgttggtttaaccgccctggaaaaaatcgtggcggaggaggag
catattcctctcattcctccccaggaagcgttaagccatttacccacagttcaactgaat
agcgaattggaaaaaaggtggttccacggccaaagattgctcttgccagatctacccgtg
ggagtggtactaatcacatcggagctaggcccagtaaaatgcttgggcgttgccctggtg
actccagaagaccatggcacggtgttacggccaaaagttgtgctgaattaa
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