KEGG   Synechococcus elongatus UTEX 2973: M744_03390
Entry
M744_03390        CDS       T03581                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
syu  Synechococcus elongatus UTEX 2973
Brite
KEGG Orthology (KO) [BR:syu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syu03400]
    M744_03390
DNA repair and recombination proteins [BR:syu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     M744_03390
    Archaeal homologous recombinant proteins
     M744_03390
SSDB
Motif
Pfam: SMC_N AAA_23 Rad50_zn_hook AAA_21 AAA_29 nSTAND3 AAA_22
Other DBs
NCBI-ProteinID: AJD56954
LinkDB
Position
complement(619883..622885)
AA seq 1000 aa
MILLRLQLHHFLSYREADLALGQQLVVVSGVSGSGKTALLEAIAWALWGQSLRGDSQDLI
QDSADWMAVTLEFQQSHQQFQVQRRHDRQTGTQLQLWQRSHPDEPWAEISQSTAIATQAQ
LTQVLGWDYTHFCHTVYVPQGQPSPWVQRSASDRYQQLAHLFQLDRLRPLALAARDRDRS
LQAEEEWFFAQRQQLQQQADQQQQLAETRSQYQQQLAALQQQRAAIDQQQQTLEQRWQAA
EHQQRDRQALAQQIQQLQTQLGDQQRLLAENQQRQAQAQHILSRALSIRAEWQQWQQSQQ
QASRWAQQTEAQQALSEQLQQVQRQYDAAVRQHQQAIATVQQQLQAGQEALVQFEPLLQQ
ATAIAAGYQQLQQARQELAQAQQRHTAAQPLLAQRQQVQTQLGQARLRLQAHLEDLQGQR
LQLRQQHRDRGELEQALASVSQTITQLEQHQHYRNQVQEKQQERSNFLARLQARQRDYEA
QLAELESQARAIAPHGTCPLCDQALDPDHWQHLQQRYQQQQTEIQNLIWVICEQFAVSER
EIQVLRQEYRDRAVDLEPYSQALEERGKLQAQLVAHDEQTQQLQQLDQQIQTLERSLAAG
DFAPDLQRRVRQLDRQIQELGYRDRDLNLAQQTVDQWQAIAERYAALQAAQAQQQRWDQE
RPRLETQLRDLQQALNHLSDSPLGQHRQQLQRQLQQVEASLRGLTDPQAAPPQAEVAERY
QALLQAEQAMPRLQAEQADLEAQVQQLQKILTASLAQQAAIATAEDRQPLQQAIADCQAQ
LQAIQAAQTNLEQAIAQLPPSRNLEAIHAQIARLDEQLQQIQQEQQPAQQLATLVDRADF
TVPLMRQWLRHLQLRCQHWLDRWGWEQGQLLWQVVSPASGAPGVQLRLQTDQGDRSINTC
ADGEAVLLDLAIRLSLVQLLAQQPDRSSRLLILDAPFSSLNPQQKNALTAALTEELDQGL
ICEADSSVKAIAADTWHVVLQNQESQLTALREAATGTGAD
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgattctgctgcgtcttcagctgcaccactttctcagttaccgggaggctgatctcgcg
ctcgggcagcagcttgtggttgtaagcggggtgtcgggatcaggcaaaaccgctctactc
gaggcaattgcatgggcgctgtggggtcagagtctgcgcggagacagtcaagacttgatc
caagactctgcggactggatggcagtgacgctggagtttcagcagagccatcagcagttt
caagtccagcgccgccacgatcgccaaacgggcacccagctccagctctggcagcgatcg
cacccggatgagccctgggctgagatcagtcaatcgacggcgatcgccacgcaagcgcag
ctgactcaggtgctgggctgggattacacccacttctgtcacacggtctatgtaccccaa
gggcagccatcaccttgggtgcagcgttcagccagcgatcgctatcaacaactcgcccac
ctcttccagctcgatcgtctccggcccttagccttggccgcccgcgatcgcgatcggagt
ttgcaggctgaagaggagtggttcttcgctcagcggcagcagctccagcagcaagcagac
cagcaacaacaactggctgaaacgcgatcgcaataccagcaacaattggccgcactgcag
cagcagcgagccgcaatcgatcaacagcagcaaactctagaacaacgctggcaagcggcc
gaacaccagcagcgcgatcgccaagccctcgcccagcagattcagcagctccaaacgcag
ctaggcgatcagcaacgcctcctagccgaaaatcaacagcgacaggcccaagcccagcac
attttgagccgcgccctcagcatccgagccgaatggcaacagtggcagcagagccagcaa
caggctagccgctgggcacagcagactgaggctcagcaagccctgagtgaacaactgcag
caggtccaacgtcagtacgatgccgccgtccggcagcaccagcaggcgatcgctaccgtt
cagcaacagcttcaagctggacaggaggcgctagtgcagttcgagccgctgctccagcag
gccaccgcgatcgcggcaggctaccaacaactacaacaagctcggcaagaattggcccaa
gcccagcaacgacacaccgcggctcaacccctgctggcccagcggcaacaggtgcaaacc
cagctaggacaagcgcgcctgcggctgcaagcccacctcgaagacctgcagggacaacgc
ctgcaactgcggcaacagcaccgcgatcgcggcgaactggaacaggcactggctagcgtt
agccagacgatcacccaactcgagcagcaccagcattaccgcaatcaagtgcaggagaag
caacaggagcgcagcaattttctggcgcggctgcaagctcgacaacgggactatgaggca
cagctggcggaactggaatcccaagcccgcgcgatcgccccccacggtacttgtccactc
tgcgatcaggccctcgatcccgaccattggcaacacctgcagcagcgctaccaacaacag
cagactgagattcaaaacctgatctgggtgatctgcgaacaatttgccgtttccgagcgg
gaaattcaggtcctgcggcaggaatatcgcgatcgcgccgtcgatctggagccctacagc
caagccctcgaagaacgaggcaaactgcaagctcagctagtcgcccacgatgaacaaacc
caacagctgcagcaactcgatcagcagattcaaacgctagaacggagcctcgccgccggc
gattttgcaccagatctgcaacggcgggtgcggcagctcgatcgccagattcaggagcta
ggctaccgcgatcgcgacctcaatttggcgcagcagaccgttgaccagtggcaggcaatt
gccgagcgctatgccgccttgcaagcggcccaggcccagcagcagcgctgggatcaggag
cgccctcgcctcgaaacgcaactgcgggacctgcaacaagccttgaaccatctctcagac
agtcccctcggccagcaccgccagcaactacagcgtcagctccagcaggtggaggccagt
ctacgtggcctgaccgatccgcaagccgccccacctcaagctgaggttgccgaacgctac
caagcactcctgcaagctgaacaggccatgcctcgccttcaagcagaacaagctgattta
gaggcgcaggttcagcaactgcagaaaatcttgaccgccagtctggcccaacaagctgcg
atcgccactgccgaggatcgccagccgttgcagcaagcgatcgcagactgccaagcccag
ctacaagcaatccaagcggcacagacaaacctggagcaggcaatcgcccaactaccgccc
agccgcaatcttgaggcgatccacgcccaaattgcccgtctagacgagcagttgcaacag
attcagcaggaacaacagcccgcccaacagctcgccacactcgtcgatcgcgctgatttc
acggttcccttgatgcgccaatggctgaggcatctccaactgcgctgccagcattggctc
gatcgctggggctgggagcaaggccagctgctctggcaagtcgtcagtcctgccagcggc
gcaccgggcgtgcagcttcgcctccagaccgatcagggcgatcgcagcatcaacacctgt
gcagacggagaagccgtgcttctggatctcgccattcggctcagcttagtgcagctcttg
gctcagcagcccgatcgttccagcaggttactgatccttgatgccccgtttagttcgctt
aatccgcaacaaaaaaacgccctgaccgcagcgctgacggaagaactagatcagggacta
atttgtgaggcagacagtagcgtgaaggcgatcgcggccgacacctggcacgtggtttta
cagaaccaggagtcgcagctcacagcactcagagaggccgcaaccggaacaggggctgat
taa

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