Synechococcus elongatus UTEX 2973: M744_04040
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Entry
M744_04040 CDS
T03581
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
syu
Synechococcus elongatus UTEX 2973
Pathway
syu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M744_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syu03019
]
M744_04040
03016 Transfer RNA biogenesis [BR:
syu03016
]
M744_04040
Enzymes [BR:
syu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M744_04040
Messenger RNA biogenesis [BR:
syu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M744_04040
Transfer RNA biogenesis [BR:
syu03016
]
Prokaryotic type
tRNA degradation factors
M744_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AJD57069
LinkDB
All DBs
Position
746784..748934
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AA seq
716 aa
AA seq
DB search
MPQLSKSLSFDGRDIRLELGLFAPQAGGSVLISSGDTAVLVAATRSTAREGIDFLPLTVD
YEERMYAAGRIPGGFLRREGRPPERATLTSRLIDRPLRPLFPSWLRDDLQVVATTLSMDE
TVPPDVLAVTGASIATLVAKIPFYGPMAAVRVGLVGDDFIINPTYREIEKGDLDLVVAGT
PAGVIMVEAGANQLPEADVIEAIDFGYEAVQELIKAQQSLLAELGIEQILPEAPNADNTL
ENFVRDRASSGVQQVLQHFSFTKSERDAALDEVKASVVEAIAALPEEDPVRSVTAAEPKA
LGNTFKALTKTLMRQQILRDGVRVDGRKLDQVRPISSQVGLLPPRVHGSGLFQRGLTQVL
SIATLGTPGDAQELDDLHPDTQKRYLHHYNMPPYSVGETRPMRSPGRREIGHGALAERAL
LPVLPSKEEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIKKPVSGAAMGLIRE
GDEYRVLTDIQGIEDFLGDMDFKVAGTDQGITALQMDMKIHGLPLEIIADAINQAKPARL
HILNKMLEAIATPRADLSTYAPRLFRIQINPEQIGLVIGPGGKTIRSITEQTGAKIDIED
TGAVTISAVDADSALRAKSIIEGMTRTITAGDVYIGKVTRIIPIGAFVEFLPGKEGMIHI
SQIADYRVARVEDELTVGDEVVVKVREIDQKGRVNLTRKGIDPEEVSAARAAVEAS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccacaactcagcaagtcgttgtcctttgatggacgcgatattcggctggagctgggc
ctgttcgccccacaggctggaggttccgttctgattagctcaggggacaccgccgttttg
gtggctgcgacccgttcgacggcacgggaagggattgattttctgccgttgactgtcgat
tacgaagagcggatgtatgcagccggtcgcattccgggcggctttctccgccgtgaaggg
cgtcctcctgaacgcgcaaccctgactagccgcttgatcgatcgcccgctgcgtccgctg
ttccccagttggctgcgggatgatctgcaggtcgtggcaaccacactctcgatggacgag
acagttccccccgacgttctggcggtgactggcgcttcgatcgctaccttagttgccaaa
attcccttctacgggccaatggcagcggtacgagtaggcttagttggcgatgatttcatc
atcaaccccacctaccgcgagattgaaaaaggcgaccttgacctcgtagtggctggtacc
cccgctggggtgatcatggtcgaggctggagctaaccagctgccagaagccgacgtgatc
gaagcgatcgactttggctatgaagccgttcaagagttgattaaggctcagcagagtctg
ctggcggagttgggcatcgagcagatcctgccggaagcacccaacgccgacaataccctc
gagaacttcgtccgcgatcgcgccagtagcggtgttcagcaagtgctgcagcactttagc
ttcaccaagtcggagcgcgatgcagccttagatgaggttaaagccagcgtcgttgaagcg
atcgctgctctgccagaagaggatccggttcgtagcgtcactgccgcagaacccaaagcg
ctgggcaacaccttcaaagccctgaccaaaaccttgatgcgtcagcaaatcctgcgcgat
ggtgttcgggtcgatggtcggaaactcgatcaggtgcggccgatctccagtcaggttggc
ttgctgccgccgcgagtccatggttctggcctgtttcagcggggtctgacgcaggtgctg
tcgatcgcgactctcggcacgcctggggatgcgcaagaactggatgatctgcatcccgac
acccagaagcgctacctgcatcactacaacatgcccccctattccgttggcgaaacgcgg
ccgatgcgatcgcccggtcggcgggaaattggccatggcgctttggcagagcgcgcgttg
cttcccgtgttgccgtccaaggaagaattcccctacgtgattcgggtggtttccgaggtg
ctgtcctccaacggctccacctcgatgggctccgtctgcggctcgacgctggcgctgatg
gatgctggcgtccccatcaaaaagccggtcagcggcgcagccatggggctgatccgcgaa
ggcgatgagtaccgtgtcctgaccgacatccaagggattgaagacttcttgggtgacatg
gactttaaggtagcgggcaccgatcagggcattacggctctgcagatggatatgaaaatc
catggtctgcccttagagatcattgcggatgccatcaaccaggcgaagccggcgcgtttg
cacatcctcaacaagatgctggaagcgatcgccacgcctcgggctgacctttcgacctat
gcgccccgcctgttccggattcaaatcaatcctgagcaaattggcttggtcattggtcct
ggtggcaaaacaatccgctctatcactgagcaaactggtgccaagatcgacatcgaagat
acgggagccgtgaccatctcggcagtcgatgctgattcggcgctgcgagcgaagtcgatc
atcgaaggcatgacccgcacaatcactgccggcgatgtctacatcggcaaagtgacccgc
atcatcccgattggagcctttgtggagttcctgccgggcaaagaaggcatgattcacatc
tcgcaaattgccgattatcgggtggctcgtgttgaagatgagctgacggtgggcgatgag
gtcgtggtcaaagtccgcgagattgaccaaaagggtcgggttaacctcacccgtaaaggg
attgatccggaggaagtctcagcagcacgggcggctgtcgaagcgtcttag
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