Synechococcus elongatus UTEX 2973: M744_05295
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Entry
M744_05295 CDS
T03581
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
syu
Synechococcus elongatus UTEX 2973
Pathway
syu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M744_05295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syu03021
]
M744_05295
03400 DNA repair and recombination proteins [BR:
syu03400
]
M744_05295
Enzymes [BR:
syu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M744_05295
Transcription machinery [BR:
syu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M744_05295
DNA repair and recombination proteins [BR:
syu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M744_05295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AJD57288
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All DBs
Position
976743..977672
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AA seq
309 aa
AA seq
DB search
MTFQVECVESRTEADQGQYGRFSIEPLARGQGTTVGNALRRVLLSNLEGTAVTAVRIGGV
NHEFATIPGVREDVLDILLNVRELVVHAHSPQPQIGRLRVVGPATVTAADVDFGPEVEVI
NPNHYIASLSEGATLEMELKVEWGTGYRAIDRSHDETTALDFLQLDAVFMPVRRVNYSVE
DARVGESTAIDRLVLEVWTNGSLSPQEALSQAASCLVALFEPLKNVSVGSTHTADPEPTP
ESQTPIEDLQLSVRAYNCLKRAQVNSVADLLSYTYEDLLEIKNFGQKSAEEVVEALERIG
IKLQESKVS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgacatttcaagtcgaatgcgtcgagagccgcactgaagccgaccaagggcaatatggc
cgcttttccatcgagcctctcgctcgtgggcaaggtacaacggttggcaatgcgctccgg
cgtgtgttgctctccaacctagaaggaacagccgtcacagctgtccggatcggtggtgtc
aaccacgaattcgcaaccatccccggcgtgcgggaggatgtcctcgacatcttgctcaac
gtccgtgagttggtggtgcatgcccacagtcctcagccccagattggtcggctgcgggtg
gtgggtccggcaactgtcacggctgctgatgttgactttggccctgaagttgaagtcatc
aatcccaatcactacatcgcttcgctctctgagggtgccaccctcgagatggagttgaaa
gttgagtggggcacgggctaccgcgccatcgaccgcagccatgacgaaacgactgcccta
gactttctgcaacttgatgctgtattcatgccggtgcgtcgggtgaactacagcgttgaa
gatgcgcgcgtcggggaatccacggccatcgaccgcctcgtactcgaggtttggaccaat
ggcagtctctcgccccaggaagcactgagccaagccgcctcttgtctcgtcgcgctgttc
gagccgttgaaaaacgtcagtgttggcagtacccacaccgccgatcctgagcccacgccc
gaaagccaaacgccgatcgaagatctgcagctttcggttcgggcttacaactgcctgaag
cgggcgcaagtgaactccgttgctgacttgctgagctacacctacgaagatctactggag
atcaaaaacttcggccagaaatcggctgaagaggtggtcgaagctctcgagcgcatcggc
attaagctccaggaatcgaaagtttcctga
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