Synechococcus elongatus UTEX 2973: M744_10005
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Entry
M744_10005 CDS
T03581
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
syu
Synechococcus elongatus UTEX 2973
Pathway
syu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M744_10005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syu03400
]
M744_10005
Enzymes [BR:
syu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M744_10005
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M744_10005
DNA repair and recombination proteins [BR:
syu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M744_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_6
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AJD58137
LinkDB
All DBs
Position
complement(1911669..1912517)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLTQQTLQRVCTGGEVLLSRTIATPTPELFLVALQQTQIQEWRRRGKY
LLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLTKHTRVRLRFEGDRELRFIDIRSFGQ
MWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRRSQRPIKTALLDQSLVAGIGN
IYADESLFRTGIHPTTPSDRLTKIQAEKLREAIVEVLTASIGAGGTTFSDFRDLTGVNGN
YGGQAWVYGRKDQPCRTCGTPIQKLKLAGRSSHFCPRCQPCS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaactgcccgaagtcgaaactgtccgccgtggactgactcaacaaaccctgcaa
cgcgtttgcacaggtggcgaagtcttactctctcgtacgatcgcgacacccacgcccgaa
ctgttcctcgtggcgctgcagcagacccaaattcaggaatggcgacgccgtggcaaatat
ttgttagctgacctcagtcgtgagggagagcctgcaggaacttggggcgtgcatctgcgg
atgacagggcagtttttctggacagagccggcaacgccgctgaccaaacatacgcgggtg
cggctgcggtttgagggcgatcgcgagttgcgatttattgatatccgcagctttggccag
atgtggtgggtaccgcccgatcgccctgtggaatccgtgattacgggcttgagcaaactg
gggccagaaccgtttgcaccggaattcaccgcccgctatctgcgcgatcgcctgcggcgg
agccaacgccccatcaaaacggcgctcctcgatcagtccttggtggcgggtattggcaac
atttatgccgatgaaagtttgtttcgcaccggtattcatccgaccacaccaagcgatcgc
ctaaccaagatccaggcggaaaaactgcgggaagcgatcgttgaggtcctcacggccagt
atcggagcaggcggcacgacctttagtgacttccgcgatctaacgggtgtgaacggtaac
tatggcggtcaagcgtgggtctatggccgcaaggatcaaccttgtcgcacttgcgggact
ccgattcaaaaactcaaactggctgggcgatcgagtcacttttgtcctcgctgtcagccc
tgttcctag
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