Streptomyces yunnanensis: MOV08_12885
Help
Entry
MOV08_12885 CDS
T09344
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
syun
Streptomyces yunnanensis
Pathway
syun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOV08_12885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syun03019
]
MOV08_12885
Messenger RNA biogenesis [BR:
syun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOV08_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WEB40082
UniProt:
A0ABY8A8R4
LinkDB
All DBs
Position
complement(2988192..2989877)
Genome browser
AA seq
561 aa
AA seq
DB search
MSHPHPELGAPPKLPEGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTSVRDRLDDIDGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGDRERLGPFECQFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDRRLTDLPAFAKLGEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFASAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARELGYLNVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVQGDTVILASSLIPGNENAVYRVINGLSRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGIPKD
RIVIAEDGVVVDLVNGIAKIAGKVQAGYVYVDGLSVGDVTEAHLKDRRILGDEGIISIFV
VVDSSTGKTVGGPNVHARGSGIDDKDFSAVVPKIDEALAKAAQDGIAEPHQLQQLIRRAV
GKWVSDNYRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcatccgcaccctgagctcggcgctccgccgaagcttcccgaaggtggcctgcgc
gtcaccccgctcggcggcctgggcgagatcggccgcaacatgacggtcttcgaatacggc
ggccggctgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gacctgatcctgcccgacttcacgtccgtcagggaccgcctcgacgacatcgacggcatc
gtgctcacgcacggccacgaggaccacatcggcggcgtcccctacctcctccgggagaag
ccggacatcccgctgatcggctccaagctgaccctggcgctcatcgaggccaagctccag
gagcaccggatccgcccctacacgctggaggtcgccgagggcgaccgcgagcgtctgggc
cccttcgagtgccagttcgtcgccgtcaaccactccatccccgacgcgctcgcggtcgcc
atccgcacccccgcgggcatggtcgtccacaccggcgacttcaagatggaccagctcccg
ctggaccgtcggctgaccgacctcccggccttcgccaagctcggcgaggagggcatcgac
cttctcctctccgactccacgaacgccgaggtccccggcttcgtcccgccggagcgcgac
atctccaacgtgctgcgccaggtgttcgccagcgcgcagaagcgcatcatcgtcgccagc
ttcgccagccatgtgcaccgcatccagcagatcctcgacgcggcgcacgagtacggccgc
agggtcgccttcgtcggccgctccatggtccgcaacatgggcatcgcccgcgaactgggc
tacctgaacgtgcccgcgggcctggtcgtcgacgtcaagaccctcgacgacctgccggac
gacgaagtggtgctggtctgcaccggctcccagggcgagccgatggccgccctctcccgg
atggccaaccgcgaccaccagatccgcatcgtccagggcgacacggtcatcctggcctcg
tcgctcatcccgggtaacgagaacgcggtctaccgcgtgatcaacggcctcagccgttgg
ggcgccaacgtggtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaagaacctcatgccggttcacggc
gaatggcgccacctccgtgccaacgccgaactgggcgcgctgacgggcatccccaaggac
cgcatcgtcatcgcggaggacggcgtcgtcgtcgacctggtcaacggcatcgccaagatc
gccggcaaggtccaggccggctacgtctacgtcgacggcctctcggtcggcgatgtcacc
gaggcccacctcaaggaccgccgcatcctgggcgacgagggcatcatctcgatcttcgtg
gtcgtggacagcagcaccggcaagaccgtcggcggccccaacgtccacgcccgtggctcg
ggcatcgacgacaaggacttcagcgcagtcgtccccaagatcgacgaggcactggccaag
gcggcccaggacggcatcgccgagccccaccagctccagcagctgatccgccgcgcggtc
ggcaagtgggtgtcggacaactaccgtcgccgcccgatgatcctccccgtggtcgtcgag
gtctga
DBGET
integrated database retrieval system