KEGG   Streptomyces yunnanensis: MOV08_12885
Entry
MOV08_12885       CDS       T09344                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
syun  Streptomyces yunnanensis
Pathway
syun03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOV08_12885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syun03019]
    MOV08_12885
Messenger RNA biogenesis [BR:syun03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MOV08_12885
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WEB40082
UniProt: A0ABY8A8R4
LinkDB
Position
complement(2988192..2989877)
AA seq 561 aa
MSHPHPELGAPPKLPEGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTSVRDRLDDIDGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGDRERLGPFECQFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDRRLTDLPAFAKLGEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFASAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARELGYLNVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVQGDTVILASSLIPGNENAVYRVINGLSRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGIPKD
RIVIAEDGVVVDLVNGIAKIAGKVQAGYVYVDGLSVGDVTEAHLKDRRILGDEGIISIFV
VVDSSTGKTVGGPNVHARGSGIDDKDFSAVVPKIDEALAKAAQDGIAEPHQLQQLIRRAV
GKWVSDNYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcaccctgagctcggcgctccgccgaagcttcccgaaggtggcctgcgc
gtcaccccgctcggcggcctgggcgagatcggccgcaacatgacggtcttcgaatacggc
ggccggctgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gacctgatcctgcccgacttcacgtccgtcagggaccgcctcgacgacatcgacggcatc
gtgctcacgcacggccacgaggaccacatcggcggcgtcccctacctcctccgggagaag
ccggacatcccgctgatcggctccaagctgaccctggcgctcatcgaggccaagctccag
gagcaccggatccgcccctacacgctggaggtcgccgagggcgaccgcgagcgtctgggc
cccttcgagtgccagttcgtcgccgtcaaccactccatccccgacgcgctcgcggtcgcc
atccgcacccccgcgggcatggtcgtccacaccggcgacttcaagatggaccagctcccg
ctggaccgtcggctgaccgacctcccggccttcgccaagctcggcgaggagggcatcgac
cttctcctctccgactccacgaacgccgaggtccccggcttcgtcccgccggagcgcgac
atctccaacgtgctgcgccaggtgttcgccagcgcgcagaagcgcatcatcgtcgccagc
ttcgccagccatgtgcaccgcatccagcagatcctcgacgcggcgcacgagtacggccgc
agggtcgccttcgtcggccgctccatggtccgcaacatgggcatcgcccgcgaactgggc
tacctgaacgtgcccgcgggcctggtcgtcgacgtcaagaccctcgacgacctgccggac
gacgaagtggtgctggtctgcaccggctcccagggcgagccgatggccgccctctcccgg
atggccaaccgcgaccaccagatccgcatcgtccagggcgacacggtcatcctggcctcg
tcgctcatcccgggtaacgagaacgcggtctaccgcgtgatcaacggcctcagccgttgg
ggcgccaacgtggtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaagaacctcatgccggttcacggc
gaatggcgccacctccgtgccaacgccgaactgggcgcgctgacgggcatccccaaggac
cgcatcgtcatcgcggaggacggcgtcgtcgtcgacctggtcaacggcatcgccaagatc
gccggcaaggtccaggccggctacgtctacgtcgacggcctctcggtcggcgatgtcacc
gaggcccacctcaaggaccgccgcatcctgggcgacgagggcatcatctcgatcttcgtg
gtcgtggacagcagcaccggcaagaccgtcggcggccccaacgtccacgcccgtggctcg
ggcatcgacgacaaggacttcagcgcagtcgtccccaagatcgacgaggcactggccaag
gcggcccaggacggcatcgccgagccccaccagctccagcagctgatccgccgcgcggtc
ggcaagtgggtgtcggacaactaccgtcgccgcccgatgatcctccccgtggtcgtcgag
gtctga

DBGET integrated database retrieval system