Streptomyces yunnanensis: MOV08_20240
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Entry
MOV08_20240 CDS
T09344
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
syun
Streptomyces yunnanensis
Brite
KEGG Orthology (KO) [BR:
syun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syun03021
]
MOV08_20240
Transcription machinery [BR:
syun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOV08_20240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
HTH_3
NirdL-like_HTH
DUF7343
HTH_24
MarR
DUF134
HTH_5
NMB0315_dom_I
HTH_37
Motif
Other DBs
NCBI-ProteinID:
WEB41372
LinkDB
All DBs
Position
4679607..4680416
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AA seq
269 aa
AA seq
DB search
MTVTARTAPKAPARESRSADTRALTQVLFAELAGLEPGTPEHTRVRAALIEANLPLVRYA
AARFRSRNEPMEDVIQVGTIGLINAIDRFDPERGVQFPTFAMPTVVGEIKRYFRDNVRTV
HVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLKIGEDEVLACLEAGRSYHATSLE
AAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQIS
AELGVSQMHVSRLLSRSFARLRSANRIDA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgacggcccgtactgcgcccaaggctcctgcccgcgagagccgtagcgcggac
acccgggcgctgacgcaggtgctcttcgccgagctggcgggcctggaacccggcaccccc
gagcacacccgcgtccgcgccgccctgatcgaggccaacctcccgctggtccgctacgcc
gcggcccgcttccgcagccgcaacgagccgatggaggacgtgatccaggtcggcaccatc
ggcctgatcaacgccatcgaccggttcgacccggagcgcggggtccagttcccgaccttc
gccatgcccaccgtcgtcggcgagatcaagcgctacttccgggacaacgtccgcaccgtc
cacgtcccgcgccgcctccacgagctgtgggtccaggtcaacggcgccaccgaggacctc
accgtgctgcacggccgctccccgaccaccgcggagatcgccgagcggctgaagatcggc
gaggacgaggtgctggcctgcctggaggcgggccgctcgtatcacgccacatccttggag
gccgcccaggagggcgacggcctgcccggcctgctggaccgcctcggctacgaggacccc
gagctggccggcgtcgagcaccgggacctcgtacggcacctcctcgtccagctccccgag
cgcgagcaacgcatccttctgctccgttactacagcaatctgacgcagtcccagatcagt
gcggagctcggggtttcgcaaatgcacgtctcccggctactgtcgcggagcttcgcccgc
ctgcgatccgcaaacaggatcgacgcctaa
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