| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
syun Streptomyces yunnanensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:syun00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOV08_23650 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:syun03021]
MOV08_23650 (rpoB)
03400 DNA repair and recombination proteins [BR:syun03400]
MOV08_23650 (rpoB)
Enzymes [BR:syun01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOV08_23650 (rpoB)
Transcription machinery [BR:syun03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOV08_23650 (rpoB)
DNA repair and recombination proteins [BR:syun03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOV08_23650 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5412361..5415846
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| AA seq |
1161 aa
MAASRNASTANTNNGDSTAPLRISFAKIKEPLGVPNLLALQTESFDWLLGNAAWKGRVEA
ALESGQEVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGGDEPLDAGVLTTDDVIATIKYLVKLHAGETETIGENGNSIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQTNPLSGLTHKRRLSALGPGGLSRERAGLDVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNVFGFIETPYRKVVDGQVTEEVDYLTADEEDRFLIAQANAKLSDDLRF
AEQRVLVRRRGGEVDLVPADEVHYMDVSPRQMVSAATAMIPFLEHDDANRALMGSNMMRQ
AVPLIKAESPLVGTGMEYRCAVDAGDVIKAEKNGVVQEVSADYITVANDDGTYTTYRVAK
FTRSNQGTSFNQKVVVDEGARVIEGQVLADGPSTDEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLSDLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPVEDMPFMEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSSLGEEWAQRLQSIGADQVEARTNVATP
VFDGAREDELAGLLENTIPNRDGDRMVLPSGKARMFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV |
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| NT seq |
3486 nt +upstreamnt +downstreamnt
ttggccgcctcgcgcaacgcctcgactgccaatacgaacaacggcgacagcaccgccccg
ctgcgcatctcttttgcgaagatcaaggagcccctcggggttcctaacctccttgcgctg
cagaccgaaagcttcgactggctgctcggcaatgccgcatggaagggtcgcgtcgaggct
gcgctggagagtgggcaggaagttcccaccaagtccggtctggaagagatcttcgaagag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgcttc
gagcctccgaagaactccatcgacgagtgcaaggagcgcgacttcacgtacgcggctccg
ctgttcgtcaccgcggagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgctcgccgggtgtgtacttcgacagctcgatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgtatcgaccgcaagcgcaagcag
tccgtgaccgtcctgctcaaggcgctcggttggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgacccgcgaggccgcg
cagacgctgctggagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctcggcggcgacgagccgctggacgccggtgtgctgacc
accgatgacgtcatcgccacgatcaagtacctggtcaagctgcacgccggcgagaccgag
acgatcggcgagaacggcaacagcatcgttgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaccaacccgctgtcgggtctgacccacaagcgccgt
ctgtcggcgctgggcccgggtggtctctcccgtgagcgggccggtctggacgttcgtgac
gtgcacccgtcgcactacggacgcatgtgcccgatcgagacccccgaaggcccgaacatc
ggtctgatcggctcgctcgcgtcctacggccgcgtcaacgtcttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgacggccaggtcacggaggaggtggactacctcaccgcagat
gaggaggaccgcttcctcatcgcccaggccaacgccaagctctccgacgacctgcgcttc
gccgagcagcgtgtgctggtccgtcgccgtggcggcgaggtcgacctcgtccccgccgac
gaggtgcactacatggacgtctcgccgcgccagatggtgtcggccgcgaccgccatgatc
cccttcctcgagcacgacgacgccaaccgcgcgctcatgggatcgaacatgatgcgccag
gccgttccgctgatcaaggcggagtcgccgctggtcggcaccggcatggagtaccgctgc
gcggtcgacgccggcgacgtcatcaaggccgagaagaacggcgtggtccaggaggtctcc
gcggactacatcaccgtcgccaacgacgacggcacgtacaccacgtaccgcgtcgccaag
ttcacccgttccaaccagggcacctccttcaaccagaaggtcgtcgtggacgagggcgcg
cgggtcatcgagggccaggtcctcgccgacggtccgtccacggacgagggcgagatggcg
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctctccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctg
acccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgcgac
acctcgctgaaggtcccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaagagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgtaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctcgaagatcctgccggtcgaggacatgccgttcatggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccagcctcggtgaggagtgggcc
cagcgcctgcagtccatcggcgccgaccaggtcgaggcgcgtaccaacgtcgcgaccccg
gtcttcgacggcgcccgcgaggacgagctggccggtctgctggagaacaccatccccaac
cgcgacggcgaccgcatggtcctcccgtccggcaaggcgcggatgttcgacggccgttcc
ggtgagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggtcagcgcttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcatacgccctccaggagctgctgacgatcaagtccgacgac
gtcaccggtcgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga |
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