Streptomyces yunnanensis: MOV08_23650
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Entry
MOV08_23650 CDS
T09344
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
syun
Streptomyces yunnanensis
Pathway
syun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOV08_23650 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syun03021
]
MOV08_23650 (rpoB)
03400 DNA repair and recombination proteins [BR:
syun03400
]
MOV08_23650 (rpoB)
Enzymes [BR:
syun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOV08_23650 (rpoB)
Transcription machinery [BR:
syun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOV08_23650 (rpoB)
DNA repair and recombination proteins [BR:
syun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOV08_23650 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WEB41958
UniProt:
A0ABY8AAY5
LinkDB
All DBs
Position
5412361..5415846
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGDSTAPLRISFAKIKEPLGVPNLLALQTESFDWLLGNAAWKGRVEA
ALESGQEVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGGDEPLDAGVLTTDDVIATIKYLVKLHAGETETIGENGNSIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQTNPLSGLTHKRRLSALGPGGLSRERAGLDVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNVFGFIETPYRKVVDGQVTEEVDYLTADEEDRFLIAQANAKLSDDLRF
AEQRVLVRRRGGEVDLVPADEVHYMDVSPRQMVSAATAMIPFLEHDDANRALMGSNMMRQ
AVPLIKAESPLVGTGMEYRCAVDAGDVIKAEKNGVVQEVSADYITVANDDGTYTTYRVAK
FTRSNQGTSFNQKVVVDEGARVIEGQVLADGPSTDEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLSDLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPVEDMPFMEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSSLGEEWAQRLQSIGADQVEARTNVATP
VFDGAREDELAGLLENTIPNRDGDRMVLPSGKARMFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgactgccaatacgaacaacggcgacagcaccgccccg
ctgcgcatctcttttgcgaagatcaaggagcccctcggggttcctaacctccttgcgctg
cagaccgaaagcttcgactggctgctcggcaatgccgcatggaagggtcgcgtcgaggct
gcgctggagagtgggcaggaagttcccaccaagtccggtctggaagagatcttcgaagag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgcttc
gagcctccgaagaactccatcgacgagtgcaaggagcgcgacttcacgtacgcggctccg
ctgttcgtcaccgcggagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgctcgccgggtgtgtacttcgacagctcgatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgtatcgaccgcaagcgcaagcag
tccgtgaccgtcctgctcaaggcgctcggttggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgacccgcgaggccgcg
cagacgctgctggagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctcggcggcgacgagccgctggacgccggtgtgctgacc
accgatgacgtcatcgccacgatcaagtacctggtcaagctgcacgccggcgagaccgag
acgatcggcgagaacggcaacagcatcgttgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaccaacccgctgtcgggtctgacccacaagcgccgt
ctgtcggcgctgggcccgggtggtctctcccgtgagcgggccggtctggacgttcgtgac
gtgcacccgtcgcactacggacgcatgtgcccgatcgagacccccgaaggcccgaacatc
ggtctgatcggctcgctcgcgtcctacggccgcgtcaacgtcttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgacggccaggtcacggaggaggtggactacctcaccgcagat
gaggaggaccgcttcctcatcgcccaggccaacgccaagctctccgacgacctgcgcttc
gccgagcagcgtgtgctggtccgtcgccgtggcggcgaggtcgacctcgtccccgccgac
gaggtgcactacatggacgtctcgccgcgccagatggtgtcggccgcgaccgccatgatc
cccttcctcgagcacgacgacgccaaccgcgcgctcatgggatcgaacatgatgcgccag
gccgttccgctgatcaaggcggagtcgccgctggtcggcaccggcatggagtaccgctgc
gcggtcgacgccggcgacgtcatcaaggccgagaagaacggcgtggtccaggaggtctcc
gcggactacatcaccgtcgccaacgacgacggcacgtacaccacgtaccgcgtcgccaag
ttcacccgttccaaccagggcacctccttcaaccagaaggtcgtcgtggacgagggcgcg
cgggtcatcgagggccaggtcctcgccgacggtccgtccacggacgagggcgagatggcg
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctctccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctg
acccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgcgac
acctcgctgaaggtcccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaagagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgtaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctcgaagatcctgccggtcgaggacatgccgttcatggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccagcctcggtgaggagtgggcc
cagcgcctgcagtccatcggcgccgaccaggtcgaggcgcgtaccaacgtcgcgaccccg
gtcttcgacggcgcccgcgaggacgagctggccggtctgctggagaacaccatccccaac
cgcgacggcgaccgcatggtcctcccgtccggcaaggcgcggatgttcgacggccgttcc
ggtgagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggtcagcgcttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcatacgccctccaggagctgctgacgatcaagtccgacgac
gtcaccggtcgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
