Streptomyces yunnanensis: MOV08_25330
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Entry
MOV08_25330 CDS
T09344
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
syun
Streptomyces yunnanensis
Brite
KEGG Orthology (KO) [BR:
syun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syun03021
]
MOV08_25330
Transcription machinery [BR:
syun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOV08_25330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_Crp_2
HTH_24
HTH_3
MarR
DUF7343
Sigma70_ECF
Apolipoprotein
KORA
Motif
Other DBs
NCBI-ProteinID:
WEB42239
LinkDB
All DBs
Position
complement(5782589..5783527)
Genome browser
AA seq
312 aa
AA seq
DB search
MSPRLDELRIEDEQSPASSTSRSDVTGHIPSQSHAAATEPVGVPDIDGLPEIPPFDEVGP
VDARALSKTLFERLESLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVG
TIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGD
ELAQKLDRAPTVGELAERLGITKDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGY
EDNGLEGIEYVESLKPLIAELPSRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRT
LVRLRKGLMIEE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaattgcgtatcgaggacgagcagagccccgcatcgtcgaca
tcccggtccgatgtgaccggtcacattccttcccagtcgcatgccgcggccaccgagccg
gtgggcgtgcccgacatcgacggcctgcccgagatcccaccgttcgacgaagtaggtccg
gtggacgcgagggccctgtcgaaaaccctcttcgagcgcctggaatcgctggaagaaggc
acccacgaatacgcgtacgtccgcaacaccctggtcgagctgaacctcgccctggtgaag
ttcgcggcctcccggttccgctcccgcagcgagcccatggaggacatcgtccaggtcggc
accatcggtctgatcaaggcgatcgaccgtttcgagttgagccgcggcgtggaattcccg
acgttcgcgatgccgaccatcgtcggcgagatcaagcgtttcttccgcgacaccagctgg
tcggtgcgggttccccggcgccttcaggaactccgcctggacctggccaaagcgggcgac
gaactggcgcagaagctggaccgggcacccacggtcggcgaactcgccgaacgcctcggc
atcaccaaggacgaggtcgtcgaagggatggccgcgagcaacgcctacaccgcgagctcg
ctggacgcccagcccgaggaggacgacagcgagggcgcgctggccgaccgtatcggctac
gaggacaacggcctcgaaggcatcgaatacgtcgagtcgctgaagccgctgatcgccgaa
ctgccctcgcgggaccggaagatcctctcgctgagattcgtcgccaatatgacgcagtcc
gagatcggcgaggagttgggcatttcccagatgcacgtctcccggctgctctcccgcacc
ctcgtacggctccgcaagggcctgatgatcgaggaatag
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