Streptomyces yunnanensis: MOV08_27410
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Entry
MOV08_27410 CDS
T09344
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
syun
Streptomyces yunnanensis
Pathway
syun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOV08_27410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syun03019
]
MOV08_27410
03009 Ribosome biogenesis [BR:
syun03009
]
MOV08_27410
Enzymes [BR:
syun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MOV08_27410
Messenger RNA biogenesis [BR:
syun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOV08_27410
Ribosome biogenesis [BR:
syun03009
]
Prokaryotic type
rRNA processing factors
MOV08_27410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
HC2
Motif
Other DBs
NCBI-ProteinID:
WEB42608
UniProt:
A0ABY8ACC1
LinkDB
All DBs
Position
6278918..6282682
Genome browser
AA seq
1254 aa
AA seq
DB search
MLESIEPTESTRSADREGDNNNSPSDTLPPRRRRRAASRPAGPPAAAAAEKAAVVTDAPP
ASSTTPAGAPDTAPAAAAQPAAEEERPARPRRRATRKATAPAGPAPESVEAPAAAVEEAP
AAAVEEEARPARARRRATRKATAPAATPEPVVEESPAAEAPAAAVEAPAAAVEEEVRPAR
ARRRATRKATAPAAIPEPVVEAPATELPAEEEEAEEAPAAAVEEEVRPARARRRATRKAT
APAATPEPVAEAPAAEEAAEAPRRRSRRRAERPAEAAVASAGSTGAADAARAAAPAARTE
EEPSTEAPARGRRRAQRPPTAVFQAPVFAEPMFQTPESAAAEHAAARQEAEPTVETPEEA
PAGAARRRRRRRGEPAEAEPTAAVPAEEPSGASAGPAAAPAAEEVAEIEEAEAAEEEHAE
AEEGERPSRRRRRGGRRRRRGDLAEGAEEQPAEGGAAEEPGAEEAEEVAEDEELTAEEQS
EGAASTSSSRRRRRRRRRSGEPAEGETTHADDPERTVVKVREPRKKDEGTGADEVQSIKG
STRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQSGERTQIGVLEDNVL
VEHFVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEALGMANGP
RRIETALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTER
ARLKQILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQAQWEEIQKKAKAASTSSPSLL
YGEPDMTVRVVRDIFNEDFSKVIVSGDDAWGTIHGYVSHVAPDLVDRLQRWTSEVDVFAT
YRIDEQLMKALDRKVWLPSGGSLVIDKTEAMVVIDVNTGKFTGQGGNLEETVTRNNLEAA
EEIVRQLRLRDLGGIVVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQM
TRKRVGQGLLESFSEQCVHCNGRGVIVHVDQPSAGGKRKKKGKAGANGAQPEQPVEVAAE
AAPEEEAMPELEPVAVTEAQLQPSVDGTDEWFGSAAEAEAAATGRGRGRRRVSRKVSAPA
GAPKAAEEAAAIVLPAAEPEPAPEPVAEAPAAEPAPAAEPAPSRPRRRATRRASAPAGSP
EAVVGEAAGTIVIGAPVAEPTPEAVAEAPEQPVEVAEAAEVAEPAPAAKKTVKKAAAKKT
TAKKAAAKKTTAKKTAAKKTTAKKAAAKKTTTKKTTTKKAAAKKTAASSASAED
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaatctattgagcccaccgaatccacgcggtccgcggaccgtgagggtgacaac
aacaattcgcccagcgacacgctgccgccgcgccgccggcgccgcgcggcctcccggccg
gccggcccgccggccgctgccgccgccgagaaggccgcggtcgtgaccgacgccccgccg
gcgtcgagcacgacccccgccggagcgcccgacaccgcacccgccgccgctgcgcagccc
gccgccgaagaggagcggccggcccgcccgcgccgccgggcgacccgcaaggcgaccgct
ccggccgggcccgcgcccgaatccgtcgaggcgcccgccgctgccgtcgaggaggctccg
gccgccgctgtcgaggaggaggcgcgtccggcgcgtgcgcgtcgtcgtgccacccgtaag
gcgacggcaccggccgccaccccggagccggtcgtcgaggagagccccgccgcggaggcg
cccgccgctgccgtcgaggctcccgcggccgctgtcgaggaggaggtgcgtccggcgcgt
gcgcgtcgtcgtgccacccgtaaggcgacggcgccggccgccatcccggagccggtcgtc
gaggcgccggccaccgagctgcccgccgaggaagaggaagcggaagaggctccggccgcc
gctgtcgaggaggaggtgcgtccggcgcgtgcgcgtcgtcgtgccacccgtaaggcgacg
gcgccggccgccaccccggagccggtggccgaggcgcccgctgccgaggaggccgccgag
gccccgcgccgtcggtcgcgccgccgtgccgagcggcccgcggaggctgccgtcgcaagc
gccggctccaccggagcggctgacgccgcgcgcgctgctgcgcccgcggcccgtaccgag
gaggagccctcgaccgaggcgccggcgcgcggtcgccgccgggcgcagcggccgccgacg
gccgtcttccaggccccggtcttcgccgagccgatgttccagacccccgagagcgccgcc
gccgagcacgccgccgcccgccaggaggcggagccgaccgtggagacgcccgaggaggcg
ccggcgggtgccgcgcgtcgccgtcgccgtcgtcgcggcgagcccgccgaggccgagccg
acggccgccgtgccggccgaggagccgtccggtgcgagcgccggccccgccgcagcgccc
gctgccgaggaggtcgccgagatcgaggaggccgaggcggccgaggaggagcacgccgag
gccgaggagggcgagcgtccctcgcgccgtcgccgtcgcggcggccgtcgtcgtcgccgc
ggtgacctggccgagggcgcggaggagcagcccgccgagggcggcgcggccgaggagccg
ggcgccgaggaggccgaggaggtcgccgaggacgaggagctgaccgccgaggagcagtcc
gagggcgctgccagcaccagcagcagccgtcgtcgtcggcgtcgccgccggcgcagcggc
gagcccgccgagggcgagaccacgcacgccgacgacccggagcgcaccgtcgtcaaggtc
cgcgagccccgcaagaaggacgagggcaccggcgccgacgaggtccagtccatcaagggc
tcgacgcgcctggaggccaagaagcagcgccgccgcgaggggcgcgagcagggccgccgc
cgggtgccgatcatcaccgaggcggagttcctggcgcgccgggaggccgtcgagcgggtg
atggtggtccgccagagcggcgagcgcacccagatcggcgttcttgaggacaacgtgctc
gtggagcacttcgtcaacaaggagcaggccacctcgtacgtcggcaacgtctacctgggc
aaggtccagaacgtcctgccgtcgatggaggccgccttcgtcgacatcggcaagggccgc
aacgccgtgctgtacgccggcgaggtcaacttcgaggcgctgggcatggccaacgggccg
cgccgcatcgagaccgcgctgaagtccggccagtccgtcctggtgcaggtcaccaaggac
ccgatcggtcacaagggcgcccggctgaccagccaggtctcgctgcccggccgctacctg
gtctacgtgcccgagggctcgatgaccggtatcagccgcaagctcccggacaccgagcgg
gcccggctgaagcagatcctcaagaagatcgtccccgaggacgcgggcgtcatcgtgcgc
accgcagcggagggcgcgagcgaggacgagctgcgccgggacgtcgagcggctgcaggcc
cagtgggaagagatccagaagaaggcgaaggcggcctccaccagctcgccgagcctgctc
tacggcgagccggacatgaccgtccgggtcgtccgcgacatcttcaacgaggacttctcc
aaggtcatcgtcagcggtgacgacgcctgggggaccatccacggctatgtctcgcacgtg
gcgccggacctcgtggaccggctccagcggtggacctccgaggtcgacgtcttcgcgacg
taccggatcgacgagcagctgatgaaggcgctggaccgcaaggtctggctgcccagcggc
ggttcgctggtgatcgacaagaccgaagccatggtcgtgatcgacgtcaacaccgggaag
ttcaccgggcagggcggcaacctcgaggagaccgtcacccggaacaacctggaggcggcc
gaggagatcgtgcgccagctgcggctgcgcgacctgggcggcatcgtcgtcatcgacttc
atcgacatggtcctggagtccaaccgggacctggtgctgcggcgcctgctggagtgcctg
ggccgggaccgcaccaagcaccaggtggccgaggtcacctcgctgggcctggtccagatg
acccgcaagcgggtcggccagggcctgctggagtccttctccgagcagtgcgtgcactgc
aacggccgcggcgtgatcgtccacgtcgaccagccgtcggccggtggcaagcgcaagaag
aagggcaaggccggggcgaacggtgcccagccggagcagcccgtcgaggtcgccgcggag
gccgccccggaggaggaggcgatgccggagctggagccggtcgcggtgaccgaggcgcag
ctgcagccgtcggtggacggcaccgacgagtggttcggcagtgccgcggaggccgaggcc
gccgccaccgggcggggccgtggccgccgccgggtgagccggaaggtgtcggcgccggcg
ggtgcgcccaaggccgccgaggaggccgccgcgatcgtgctgccggccgccgagccggag
cccgctccggagccggtcgccgaggcgccggcggcggagcccgctcccgccgcggagccc
gcgccgtcccgtccgcgtcgtcgggccacccgtcgggcgtccgctccggcaggttcgccg
gaggccgtggtgggtgaggccgcggggacgatcgtgatcggcgccccggtcgccgagccg
acgcccgaggcggtcgccgaggcccccgagcagcccgtcgaggtcgctgaggccgccgag
gtcgccgagccggcgcccgcggcgaagaagaccgtgaagaaggcggcggcgaagaagacc
acggccaagaaggccgcggcgaagaagaccacggccaagaagacggcggcgaagaagacc
accgccaagaaggccgcggccaagaagaccaccacgaagaagacgacgacgaagaaggcg
gcggccaagaagaccgcagcttcgtccgcttccgcggaggactga
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