Picosynechococcus sp. PCC 73109: AWQ23_05180
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Entry
AWQ23_05180 CDS
T05693
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
syv
Picosynechococcus sp. PCC 73109
Pathway
syv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWQ23_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syv03019
]
AWQ23_05180
03400 DNA repair and recombination proteins [BR:
syv03400
]
AWQ23_05180
Enzymes [BR:
syv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWQ23_05180
Messenger RNA biogenesis [BR:
syv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWQ23_05180
DNA repair and recombination proteins [BR:
syv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWQ23_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
Cas3-like_C_2
ResIII
DUF5537
Motif
Other DBs
NCBI-ProteinID:
AMA08756
LinkDB
All DBs
Position
complement(1070668..1072113)
Genome browser
AA seq
481 aa
AA seq
DB search
MTQTWAQVQHTFQQIWGYDDFRPPQDQIIHSLLAGQDALIIMPTGGGKSICFQLPAILQT
GLTLVVSPLVALMENQVQTLQAKRLPARLLHSQLSKLERWQTLQAVAKNQLRLLYLSPET
LLSPPVWEILIQPQLKVNGLILDEAHCLVQWGDTFRPAYRRLGAVRPALLRHKPKGTKMA
IAAFTATADPQARKSISQTLQLKSPKKFVESPYRPNLQLASRTVWSPKGKRDQLHRLLQT
NAKASGLIYVRSRREAEALAMTLGQQNYQTAAYHAGLSPGDRRQQEKDWQTGRLQFVVCT
NAFGMGIDKADVRWILHYHPPSLLAEYLQEIGRAGRDGKKSTALSLVSEPTGLLNPEDKN
RTRFFQQNLQKQIRHAAKLAQTLPLQGSILELDHQAELSLGILHSTGQLRWRDPFTYERQ
PTLDPKAFTLLKQQQIHAVRQLQTFWRQKTCRWQFLIDSFGFHDQAKDFRCGHCDRCQNS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacttgggcgcaggtacagcacaccttccaacaaatttggggctacgatgac
tttcggccaccccaggatcagattatccacagtttactcgccggacaggatgctttgatt
atcatgcccaccggtggcggcaaatccatttgttttcaactgccagctattttacaaacg
ggtctgaccctggtggtttctcccttggtcgctctcatggaaaatcaagtgcaaactctc
caggcaaaacgcctcccggcccgactcctccacagtcagttgtcaaaattagagcggtgg
caaaccctgcaggcagtagccaaaaaccagttgcgcttgctgtatctatcgccagaaacc
cttttaagtcccccggtttgggaaatactgattcaaccccagctcaaggtgaatggttta
atcctcgatgaagcccattgtttggtgcagtggggggatacctttcgtccggcctaccga
cgcttaggggctgtgcgtcccgccttactacgccacaaacccaagggcacaaaaatggcg
atcgccgcttttacggccaccgctgatccccaagctcgaaagagtatcagccaaaccctc
cagctcaagagtccaaaaaaatttgtcgagagtccctatcgccccaatttacagttagcg
agccgcaccgtttggagtcccaagggcaaacgagaccagttgcaccgattgctacaaacc
aatgccaaggcgtcggggttgatttatgtccggtcgcggcgggaggcggaagccctagcc
atgaccctggggcaacaaaattatcagacagcggcctaccatgcgggtcttagtccaggc
gatcgccgccaacaggaaaaagattggcaaacggggcgcttacaatttgtcgtttgtact
aatgcctttgggatgggcattgataaagctgatgtgcgctggattcttcactaccatccc
cctagtctgctggcggagtatctccaggaaattggtcgcgccggccgcgatggaaaaaaa
agcacagccctaagtttggtcagtgaacccacaggccttttaaacccggaggataaaaat
cgcacgcgctttttccaacaaaatctccaaaagcagatccgccacgccgcaaaattggcc
cagacccttcctctccagggcagcattttagaactcgatcaccaggcagaattaagccta
gggattttacacagcaccggacaactccgctggcgggatccgtttacctacgaacgtcag
ccaaccttagacccgaaagccttcacacttctgaaacagcaacaaatccacgctgttcgc
cagctacaaaccttttggcgacaaaaaacctgccgctggcaatttttaatcgacagtttt
ggtttccatgaccaggccaaagacttccgctgtggccattgcgatcgctgtcagaactct
tcatga
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