Picosynechococcus sp. PCC 73109: AWQ23_07925
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Entry
AWQ23_07925 CDS
T05693
Name
(GenBank) iron ABC transporter substrate-binding protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
syv
Picosynechococcus sp. PCC 73109
Pathway
syv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWQ23_07925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syv03019
]
AWQ23_07925
03016 Transfer RNA biogenesis [BR:
syv03016
]
AWQ23_07925
Enzymes [BR:
syv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AWQ23_07925
Messenger RNA biogenesis [BR:
syv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWQ23_07925
Transfer RNA biogenesis [BR:
syv03016
]
Prokaryotic type
tRNA degradation factors
AWQ23_07925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
OB_Dis3
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
AMA09249
LinkDB
All DBs
Position
complement(1654415..1656688)
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AA seq
757 aa
AA seq
DB search
MDFSIATLLSFFTDDKLVAGKFLEKKLECRSEEDTEQLQIILDALERSNILVKERGKYRR
VPEADVVEAKLRCSSKGFCFAIQDSEDADDIYIRESYLSNAWNGDRVLVKIIKEGTRRRS
PEGVVRLILERANPSLLARVVQKDEGFRAVPLDDRLLFELELQDETDRLQQAIDHLVHVS
VVQYPIAQYLPQGSVTKVLGSDAEAAADTDIVCCKHDLLRQFPEEVLAAVKDIPTKLTKK
MLAKRRDFRDQLTITIEDEIHLTPENQAFIENAFTLQKTEAGQWQLGIHLADVAEFVPAQ
GVLDRWAKKHGTAVFLGQMTIPLFPPEFKEKVELRPGGDRLTMSILLTFDDQGNVAEFEI
TPSVIRVNQSLSYQKIQHLLSSGETAEAELADVATLLNDLIFNLSPLVKAQRLQRGGFQI
SLPEVTSAFKDEGRFGTMIVSPSLPVRSLLAEVMILAGRAVAQHMLALELPAIYCYQANP
DFESLENLIKLGNNLNLKLKLESEEELLPHDYQHFIQEFSQTDMTKILNYLLQETLDVPR
YGAHPHPHFGLAYRDGYSRVCAPGQRYGDLVMQRILKLIFSEGRDRRSSRVKVGVNLGSS
TCHNQVNWKVLPTPIQTELEETIASLILQLNDQEKVADDAEKDLQGLQKAEKMKAHTGHT
FKGLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRTAYRLGNTV
DVEVKSVDYYRQQIDLAIAKNTNSDPDDAAAENWEEE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcaatcgccacactgctgtctttctttacagatgacaaattggttgccggt
aaattcctcgaaaagaaattagagtgtcgctctgaggaagatacagaacagctccagatt
attcttgatgccctagagcgctcgaatattttggtgaaggaacggggtaaatatcgccgg
gtgccggaagcggatgtggtcgaggcaaagctacggtgttcgagtaagggtttttgtttt
gcgatccaggattctgaagatgctgatgatatttatatccgggaaagttatctcagcaat
gcttggaatggcgatcgcgttttagtcaaaatcatcaaagaaggaacgcggcggcgatcg
ccagagggagtagtccgtttaattttagaacgggccaatccttccctcctagcgcgggtg
gtccaaaaagacgaaggcttccgggcagtgccccttgatgatcgcctcctgtttgaactt
gaactccaggacgaaacagatcggctccagcaggccattgatcacctcgtccatgtttcg
gtggtgcaatatcccatcgcccagtacctcccccaggggtctgtcaccaaggtgttgggg
agtgatgccgaggccgccgctgacaccgatattgtctgttgtaaacatgatttactgcgc
caatttcccgaggaggttttggctgccgttaaggacattcccacaaaactaaccaaaaaa
atgctcgccaagcggcgggattttcgcgaccaattgaccatcaccatcgaggatgaaatt
cacctcaccccagaaaaccaagccttcattgaaaatgcatttacactgcaaaaaaccgag
gctggacagtggcaactgggcatccacttagcggacgtggcagaatttgtcccggcccag
ggagtcctggatcggtgggcgaaaaaacatggtacggcggtgtttctcggtcaaatgacc
attccactatttccaccagaatttaaggaaaaggtggagcttcgtcctgggggcgatcgc
ctgacgatgtccattctcctcacctttgatgaccaggggaacgtggcagaatttgaaatt
acccccagtgtgatccgcgttaaccagagcctgagttaccaaaagattcagcacctcctc
agtagtggggaaaccgcagaggctgaactggccgatgtcgcaaccctgctgaatgattta
atttttaacctcagtcctttagtcaaagcccagcgcctgcaacggggcggtttccagatt
tctctacccgaagtaacttctgcttttaaagatgaagggcgttttgggacgatgattgtt
tcaccaagcttgccggtgcggtctctcttggcagaggtgatgatcttggcgggtcgagcc
gtagcccaacatatgctggccctagaactgccagccatctattgctaccaagcgaatcct
gattttgagagcctcgaaaatctgattaagttgggcaataatctaaacctgaagctcaag
ctcgaatcggaagaggagctgttaccccacgattatcagcactttatccaagagttcagc
cagacagacatgacaaaaatcctgaactatctgcttcaggaaaccctggatgttccccgc
tatggtgcccatccccacccccattttggcttggcctaccgggacggttacagtcgcgtg
tgtgcgccggggcaacgctatggtgacttggtgatgcagcgtattctaaaactcattttc
tctgaggggcgcgatcgccgttcgagtcgcgtcaaggtcggggttaacctcggcagcagc
acttgtcataaccaggtgaactggaaagtgctaccaacgccgatccaaacggaattagaa
gaaaccattgccagcctaattttgcaactcaacgaccaagagaaggtggccgatgacgcc
gaaaaagatctccagggactccaaaaggctgaaaaaatgaaggcccacacgggacacact
tttaagggattgatcaccggggtgcagtcctatggtttctttgtagaaatcgaggatctg
cttgtggaaggtcttgtccatgtcagctccctcaaggatgactggtatgaatatcgcgcc
cgacacagttgtctggtgggtcggaaaaatcgcactgcctatcgcctcggcaataccgtc
gatgtggaagtgaagagtgtcgattattatcggcaacagattgatctggcgatcgccaaa
aataccaattcagacccagatgacgcggctgcggaaaattgggaagaagaataa
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