Picosynechococcus sp. PCC 73109: AWQ23_09675
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Entry
AWQ23_09675 CDS
T05693
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
syv
Picosynechococcus sp. PCC 73109
Brite
KEGG Orthology (KO) [BR:
syv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syv03021
]
AWQ23_09675
Transcription machinery [BR:
syv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWQ23_09675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_24
HTH_3
HTH_17
HTH_23
Sigma70_ECF
HTH_Tnp_ISL3
HTH_Crp_2
Phage_CI_repr
HTH_8
DUF134
KORA
HTH_28
LacI
Xre-like-HTH
HTH_30
HTH_AsnC-type
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AMA09565
LinkDB
All DBs
Position
2008075..2008854
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AA seq
259 aa
AA seq
DB search
MEPTTTKVSDNIKSKTLELLQEYRQSQDVKIRNQIVSLNIGLVRKEAHHWSRQCSENFDD
LMQVGSLGLLRAIERFTLERGNAFSSFANPYIRGEIQHYLRDKSSTVRIPRRMLQLRQQS
NRFIHAFRQEHNRQPSAIEIAEHLNISVTEWQSINLAYQNRDPVSLDVSVKADQGENTSL
GDLVPDPGYKSFQLAIEDQIRIQQGLAQLEEHTRKVLEFVFLHDLTQKEAADLLGVSVIT
VSRRIKKGINSLKKILGGD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggaacctacgacgacaaaagttagtgacaatattaagtcaaaaaccctggaactgtta
caggaatatcggcagtcccaagatgtcaaaattcgtaatcagattgtaagtttaaatatt
ggcttggttcgcaaagaagcccaccattggtcgagacaatgtagcgaaaattttgatgat
ctcatgcaggtggggagcttgggtttactccgggccattgagcgattcaccctagagcgg
ggcaatgctttcagttcctttgcgaatccctatatccgcggtgaaattcaacattacctg
cgagataaaagctctactgtccgtattccccgccgaatgttgcaattgcggcaacagtct
aaccgctttatccacgcttttcgccaagaacataatcgacaaccctctgccatcgaaatt
gctgaacacctcaacatttctgtaactgaatggcaatccattaatctggcttatcaaaac
cgtgatcccgtcagtcttgacgtttctgtaaaagctgaccaaggggaaaatacttcttta
ggagatctggttccggatccgggttacaaaagctttcaactggccattgaagatcaaatt
cgcattcaacagggccttgctcaactcgaagaacatactcgcaaggtattggaatttgtt
tttctccatgaccttacccaaaaagaggccgctgacctactaggagtgagtgttattacc
gtgtcacggcggattaaaaaagggattaattcccttaagaaaatcctcggtggcgattag
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