Picosynechococcus sp. PCC 73109: AWQ23_11245
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Entry
AWQ23_11245 CDS
T05693
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
syv
Picosynechococcus sp. PCC 73109
Pathway
syv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
syv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWQ23_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syv03400
]
AWQ23_11245
DNA repair and recombination proteins [BR:
syv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWQ23_11245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWQ23_11245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_7
AAA_22
AAA
CorA
Motif
Other DBs
NCBI-ProteinID:
AMA09849
LinkDB
All DBs
Position
2336452..2338473
Genome browser
AA seq
673 aa
AA seq
DB search
MSNGSNVLFRLHAPFEPTGDQPQAIAKLVQSLESQAKYQTLLGATGTGKTFTMAAVIAQM
QKPTLVLAHNKTLAAQLCNELRQFFPYNAVEYFISYYDYYQPEAYIPVTDTYIEKTASIN
DEIDMLRHSATRSLFERKDVIVVASISCIYGLGIPSEYLKAAISLKVGEELDQRAVLRQL
VTVQYNRNDTDLSRGNFRVKGDILEIVPAYEDRVIRVEFFGDEIDAIRLLDPVTGEILQS
LDQVNIYPARHFVTPQEQLAIACEQIKAELDSQLTVLEAENKLLEAQRLKQRTSYDLELL
QEVGYCNGVENYSRFLAGREAGSPPECLIDYFPEDWLLVVDESHVTVPQIRGMYNGDQAR
KKVLIDHGFRLPSAADNRPLKSEEFWQKVNQCVFVSATPGNWEIEQSEAQVIEQVIRPTG
VVDPEIDVRPTDGQVDDLLGEIRQREKLKERVLITTLTKRMAEDLTDYFSDQEVAVQYLH
SEIKSIERIEILQALRKGEFDVLIGVNLLREGLDLPEVSLVAIMDADKEGFLRAERSLIQ
TIGRAARHVRGQAILYADNLTDSMAKAIAETERRRKIQIEYNKKHNITPQPIKKRDENAI
LSFLDISRRLNTQQLQQVVEHMEEVPLEKIPDVIKQLEEQMKEAAKNLEFEQAALLRDQI
KKLRHQLLGSHDN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgggagtaatgttttgtttcgtctccatgccccttttgaacctactggtgat
caaccccaggcgatcgccaaattggtgcaatccttagaatcccaagcgaaatatcagacc
ctcttgggggcgacgggtacgggcaaaacctttacgatggcggcggtgatcgcccagatg
cagaaacccaccctcgttttggcacataataaaaccctcgcggcacagctttgtaacgag
ttgcggcaattttttccctacaacgccgtggaatatttcattagttattacgactactat
caaccggaagcctacattcccgtcaccgatacttatattgaaaaaaccgcttcgatcaac
gacgaaattgatatgttgcgccactccgccacgcgatcgctgtttgaacgcaaggatgtg
attgtggtggcttccattagttgcatttacgggttagggattccgagtgaatatttaaag
gcagctatttctctcaaagtaggggaagaattggatcagcgggcggtactgcggcaactg
gtgaccgtgcaatataaccgcaatgataccgatttaagtcgcggcaattttcgggtgaag
ggcgacattttagaaatcgttcctgcctacgaagatcgggtaattcgcgtcgaatttttc
ggggatgaaattgatgcaattcgtctccttgatcccgtcacgggtgaaattttacaaagc
ctcgatcaggttaatatttatcccgcccgccactttgttacgccccaagaacagttggcg
atcgcctgtgaacaaatcaaagccgaattagatagtcaactcacagttttagaagcagag
aataaactcctcgaagcccagcgtttaaagcagcgaacgagttatgatctcgaactttta
caggaagttggttattgtaatggtgtcgaaaattattcccgtttcttagcgggtcgggaa
gccggatcgccccccgaatgtttaattgattatttccctgaagattggcttttagtggtt
gatgaatcccatgtcactgtgccgcaaattcggggaatgtataacggtgatcaagcccgc
aaaaaagtcttaattgaccatggctttcggttacctagtgccgccgataatcgtccttta
aagtctgaagaattttggcaaaaagtcaatcaatgtgtgtttgtttctgcgacccccggt
aattgggaaatcgagcaatcagaagcgcaggttattgagcaagtcattcgtcccacaggc
gttgtcgatccagaaattgatgtgcgccccaccgacggacaagtggatgatctattaggg
gaaattcgtcagcgggaaaaattaaaagaacgagttttaattaccactttaacgaaacga
atggcggaggatttaacggattatttcagtgaccaggaggtagccgtgcaatatctccat
tctgagattaaatccatcgaacgaattgaaattttgcaggcgctccgcaaaggtgaattt
gatgttttaattggggtcaatttactccgagaaggtttagatttaccggaggtttctctc
gtggcgattatggatgccgataaggaagggttcctgcgggcggaacggtctttaatccaa
accattgggcgggccgcccgccacgtgcggggtcaggcgatcctctatgccgataatctt
accgatagtatggcaaaggcgatcgccgaaacagaacgcagacgcaagatccagatcgaa
tacaacaaaaaacacaacatcaccccccaaccgatcaaaaaacgcgatgaaaacgcaatt
ttatcttttctcgatatttcccgccgcttaaatacccagcaattacaacaagttgttgaa
catatggaggaagtccccctcgaaaaaattcccgatgtgattaagcagctagaagagcaa
atgaaagaagccgccaaaaatctcgaatttgaacaggccgctctactccgcgatcaaatt
aaaaaactccgccatcaacttttagggagtcacgataactag
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