Parasynechococcus marenigrum: SYNW0005
Help
Entry
SYNW0005 CDS
T00144
Name
(GenBank) putative DNA topoisomerase chain A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syw03032
]
SYNW0005
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW0005
Enzymes [BR:
syw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SYNW0005
DNA replication proteins [BR:
syw03032
]
Prokaryotic type
DNA Topoisomerases
SYNW0005
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SYNW0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TR61B_FKBP-like
Motif
Other DBs
NCBI-ProteinID:
CAE06520
UniProt:
Q7UA91
LinkDB
All DBs
Position
complement(5899..8373)
Genome browser
AA seq
824 aa
AA seq
DB search
MAEERVESIALHQEMQRSYLEYAMSVIVGRALPDARDGLKPVQRRILYAMQELGLTPDRP
YRKCARVVGDVLGKYHPHGDQAVYDALVRLVQTFASRHPLLDGHGNFGSVDDDPPAAMRY
TETRLAPIAHQALLEEIGDDTVDFAPNFDGSQQEPTVLPAQLPFLLLNGCSGIAVGMATS
IPPHNLGEVVDGLVALIRQPELSDSKLLELIPGPDFPTGGEVLLSSGLRDTYLVGRGSIP
MRGIAHIEEVQPGKGHHKRNAVVVTELPYQLSKAGWIEKLAESVNDGKIGGIADIRDESD
REGMRVVVELRRDADPAKVLADLQRRTALQSNFGAILLALVDGQPRQLSLRQLLQTFLDY
RELTLIRRTSHALRKTEDRLEVVDGLITALNNLQAVITMIQEARDAASARASLMVRLDLS
ERQADAVLAMPLRRLTGLEQESLRQELEELQAERERLRLLLDNRDQLLDAMVQELKGLKK
RFSTPRRTRLVEGGDALMAERAASQRPNTELLRQQALEALPADARLLIQADGQVKVMSPP
VLGRMHLSEPCAVGDHPSPAQVILPIEPSPRLLGVSASGRVALVRWEFAGQQPGSLEKFL
PSGLDGDPLIAILELPVGDGTEFSLGLLSSDGRFKRLPLADVLDLSGRATSVVKLKEGLS
LCSAVICREHSDLVLVSSMGRLLRLPVNDSVLPKMGRLAQGPMTMRLLPGEELVGSLSID
VAETDPTLLLVSRKGQMTRIDLTPLRRCQRGDLGIMAVVLSADEDSVAGLCSGDSLAGIV
TDQKRHGRLDASAVELTAPGQSWGNQLDLNSKEQVFSVVALKTS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcgcgttgaatcgattgccctgcatcaggagatgcagcgttcctacctc
gaatacgccatgagtgtgatcgtgggcagggccttgcccgatgcccgcgacggcttgaaa
ccggtgcaacgccggattctctatgcgatgcaggaactggggctcaccccagaccggccg
taccgcaagtgcgcccgcgtcgtcggcgacgtcttgggcaaataccacccccacggcgat
caagcggtttatgacgccttggtccggcttgttcagaccttcgccagtcgacacccacta
ctggatggtcacggaaacttcggttctgtcgacgatgatccgccggcagccatgcgttac
accgaaacacgcctggcaccgattgctcaccaggcattgctggaggaaatcggcgacgac
accgttgatttcgcaccgaatttcgatgggtcccagcaggaacccaccgtgctgccggcg
caactgccctttctcctgctgaacggctgttcgggcattgccgtgggcatggccaccagc
atccctccccacaacctcggcgaagtggtggatggcctagtggccttgattcgtcaaccg
gaactcagcgacagcaaactgctggaactcattccaggacctgatttcccaacgggtggg
gaggtactgctgagcagtggcctccgcgacacctacctggtgggacggggcagcatcccg
atgcgtgggattgcccacatcgaagaagtgcaacccggcaagggtcaccacaaacgtaat
gccgttgtggtgacggaactcccctaccagctgagcaaagccggctggatcgaaaagctg
gcggaatcggtgaatgacggaaagatcggcggcatcgccgacatccgcgatgaaagcgac
cgcgaaggaatgcgggtggtggtggagctgcgacgcgatgccgatccagccaaggtgctg
gctgatctgcaacggcgcacggcgctgcagagcaacttcggtgccatccttctggccctt
gttgatggtcagccccgccagctctccctacgccagttgttgcagaccttcctggattac
agggaactaaccctgatccggcgcaccagccatgctttgcgcaaaacggaagaccgcctt
gaagtggtcgacggcctgatcaccgcgctgaacaaccttcaggcagtgatcacgatgatt
caagaagctcgcgatgctgcttcggcgcgagccagcctgatggtgcgcctcgatttgagt
gaacgccaggctgacgccgttctggccatgccactgcgacggttgactggtctggaacag
gaaagcctgcgtcaggaactcgaggagctgcaagcggaacgggaacgtttgcgcctgctg
ctggacaaccgggatcaactgctcgatgccatggtccaggagctgaagggactgaaaaag
cgcttcagcacgccgcgccggacgcgactggtggaaggtggcgatgctctgatggcagaa
cgggccgccagccagcgacccaacactgagctgctgcgtcagcaggccctggaggccttg
cctgccgatgcacgattgctcatccaagctgatgggcaggtgaaggtgatgagtcccccg
gtgctgggtcgcatgcacctgtccgaaccttgtgccgtgggtgaccacccctctccggca
caggtcatcctcccaatcgaaccatcacctcgactcctgggggtcagcgccagcgggcgc
gttgctttggtccgctgggaattcgccggacaacagcctggatccctggagaaatttcta
cccagcggtcttgacggtgacccattgatcgccatcttggaactccccgtgggtgatggc
acagagttcagccttgggctgctcagcagcgatggacgctttaagcgactccccctggcc
gacgttctggacctctccggccgagccaccagcgtggtgaagttgaaggaaggcttgagc
ctttgttcagccgtgatctgtcgcgagcacagcgatctggtcttggtcagcagtatgggg
cgtctgctgcggctgcccgtgaatgattccgtgctgcccaagatggggcgtctggcgcag
ggaccgatgaccatgcgtcttcttcccggagaagaactcgtggggagcctgtcgatcgac
gtagctgaaacagatccaaccctgctgctggtcagccgcaaaggtcagatgacgcggatc
gacctcactccactgcgtcgttgccaacggggagatctgggaatcatggcggttgtgctc
agtgccgatgaagactccgtggctggactttgttccggagattccctggccggaatcgtg
accgatcagaaacgccatggaagactggacgccagtgcagttgaattaacagcaccaggc
cagtcctggggcaatcaacttgatctgaacagcaaagagcaggttttttcagtggtagct
ctgaaaaccagctga
DBGET
integrated database retrieval system
