Parasynechococcus marenigrum: SYNW0115
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Entry
SYNW0115 CDS
T00144
Name
(GenBank) putative adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYNW0115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW0115
Enzymes [BR:
syw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SYNW0115
DNA repair and recombination proteins [BR:
syw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SYNW0115
Prokaryotic type
SYNW0115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
NUDIX
HHH
HHH_5
EndIII_4Fe-2S
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
CAE06630
UniProt:
Q7U9Y7
LinkDB
All DBs
Position
114154..115296
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AA seq
380 aa
AA seq
DB search
MGQRSGAEHRDLSALAPELSQSLLAWWEIHGRKDPALKPWMFTKDGRWPEPHEHLNVLEC
WIAEVMLQQTQLKVVLPYWQGWMKVFPTVDALAAASLEQVRLQWQGLGYYSRARRLHAAA
QRLAQGPWPRDLDSWMGLPGIGRTTAGSILSSGFNAPLAILDGNVKRVLARLHAHPRPPA
REQVLFWQWSEVLLDPARPRDFNQALMDLGATVCTPRNPDCGRCPWQFCCAAYAAGDPTR
WPMTDAPKPLPFQVIGVGVVLNAEGHVLIDQRLDEGLLGGLWEFPGGKQEPGESIEACIE
RELKEELGIVISVGEELITLDHAYSHKKLRFVVYLCAWVSGDPQPLASQQVRWVSPDQLD
TFAFPAANAKMIEALRRSIN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaacgaagcggcgccgaacatcgtgacctcagcgccctagcgcctgagctcagt
caatccctgttggcctggtgggaaattcatggtcggaaggaccctgcgctcaagccgtgg
atgttcaccaaggacggcaggtggcccgaaccccatgaacatctcaatgtcctggagtgc
tggatcgccgaggtgatgctgcagcagacccagctgaaggtggttttgccctattggcag
ggttggatgaaggtgtttcccaccgttgatgcgttggccgcggcgtcgcttgagcaggtg
cggttgcaatggcagggccttggctattactcccgagcccgccgtctgcacgctgcagcg
cagcgtttagcccagggaccatggccccgggatctggacagttggatgggtctgccgggc
attggccgcaccaccgcaggcagcattttgtccagtggcttcaacgcacctttggcaatc
ctcgacggcaacgtcaagcgtgtgttggcgcgtttgcatgcgcaccctcgccctcccgcc
cgtgagcaggtcttgttctggcagtggagtgaagtcttgctggatccggcgcgaccccgg
gatttcaaccaggccctgatggatctcggggccacggtctgtaccccccgcaaccccgac
tgtgggagatgtccgtggcagttctgttgtgctgcctacgctgccggcgatccgacccgc
tggccgatgaccgatgccccgaaacccctcccctttcaggtgatcggtgtcggggtggtg
ttgaacgctgaaggtcacgtcttgattgatcagcgccttgatgaggggcttctcggtggc
ctgtgggagttccctggcggtaagcaggagcctggtgaatcgatcgaggcctgcatcgag
cgggagctcaaggaggagttgggcattgtgatcagcgtcggcgaggagctcatcacgctg
gaccacgcctacagccacaagaaactacggtttgtggtgtatctgtgtgcctgggtctcc
ggtgatcctcagcctttggccagccaacaagttcgctgggtgagtccagatcaactcgac
acttttgcgtttcctgctgctaacgccaaaatgattgaggcgttgcggaggtcaatcaac
tga
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