Parasynechococcus marenigrum: SYNW0181
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Entry
SYNW0181 CDS
T00144
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03420
Nucleotide excision repair
syw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SYNW0181
03430 Mismatch repair
SYNW0181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW0181
Enzymes [BR:
syw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNW0181
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYNW0181
MMR (mismatch excision repair)
Other MMR factors
SYNW0181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
NPHP3_N
AAA_11
ResIII
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAE06696
UniProt:
Q7U9S2
LinkDB
All DBs
Position
180173..182566
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AA seq
797 aa
AA seq
DB search
MSFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGEHGADPAQILAVTFT
NKAAREMKERLEVLLAQKLAQSQYGQPWSTLPPVDQRQLRSRIYREVSKELWIGTFHALF
ARMLRYDIDKFKDAEGLSWTKQFSIYDEADAQSLVKEIVTQELQLDPKRFEPKKTRWAIS
NAKNQGWLPDQLEANAEGQRGKLTANVYRRYRRALAANNALDFDDLLLLPVQLLQQNEQV
RSYWHRRFAHVLVDEYQDTNRTQYDLIKLLVTDGKDPQTYNNWSGRSVFVVGDADQSIYS
FRAADFTILMGFQEDFGDQAPDDATRTMVKLEENYRSTATILAAANALIANNSERIDKVL
RPTRGDGELITLTRCDDEIAEAEAVVHRLRTMEAANPELSWGDMAVLYRTNAQSRSIEES
LVRWGIPYIVVGGLRFYDRREIKDLLAYLRLLVNPADTVSLLRVINVPKRGIGKTTIQRL
TDAANQLGIPLWDVVSDAEAVRSLGGRSARGLLQFCELLHDLRRQVQEVAPSELIQQVME
KSGYISELIAEGTDEAEERRRNLQELVNAALQYQEENEEGDLEGFLATAALSSDADSKDT
AADRVTLMTLHSSKGLEFPVVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAKER
LFLSHASERRLWGGMREAAVPSVFLSELPEALVQGDLPQSGGAALRRERRLERLTRVDRD
RPSSAPANAVRRRQAGPAPGRSWSVGDRVTHASFGVGEITHTFGSGEKVSIAVKFAGMGP
KILDPRLAPIEPIAADG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctggccggcctcaacgacgcccagcgcagggcggtggaccaccacgaaggg
cccctgctggtggtggccggtgccggcagcggcaagacccgcgccctcacccatcgcatc
gcccatctgatcggtgagcacggtgctgatcccgcccagatcctggcggtgaccttcacc
aacaaggccgcccgcgagatgaaggagcggctggaggtgctgctggctcagaagctggcc
cagagccagtacggccagccctggagcaccttgccgccggttgatcaacggcagctgcgc
tctcggatttaccgcgaggtcagcaaggagttgtggatcggcaccttccacgccctgttc
gcgcggatgctccgctatgacatcgacaagttcaaggacgctgaggggctgagctggacc
aagcagttctcgatctacgacgaggccgatgcccagagcctggtgaaggagatcgtcacc
caggaactgcagctggatcccaagcggttcgagccgaagaagacccgctgggccatcagc
aacgccaagaaccagggctggctgccggatcaactggaagccaatgctgaaggtcagcgg
ggcaagctaaccgccaatgtgtaccgccgctaccgcagggcgctggcggcgaacaatgcg
ctggattttgatgatctgctgttgctgccggtgcagctgcttcagcagaacgagcaggtg
cgtagctactggcaccgccgctttgcccatgtgttggtggatgagtatcaagacaccaac
cgcacccagtacgacctgatcaagctgctggtcaccgatggcaaagacccgcagacctac
aacaactggagtgggcgctcggtgttcgtggtgggagatgccgaccagagcatctacagc
ttccgcgccgccgacttcacgatcctgatgggttttcaggaggacttcggtgatcaggcg
ccggacgacgccacccgcacgatggtgaagttggaggagaactaccgctccaccgccacg
atcctcgcggcggccaatgccctgatcgccaacaacagcgagcggatcgacaaggtgctg
cgacccacccgcggcgacggggagttgatcaccctcacccgttgtgatgacgaaattgcc
gaggccgaggcggtggtgcatcggctgcggacgatggaggcggccaaccccgagctgagc
tggggagatatggccgtgctgtatcgcaccaatgcccagtctcgctcgatcgaggaatcg
ctggtgcgctggggtatcccctacatcgttgtagggggtctgcgcttctacgaccggcgg
gagatcaaggatctgctggcctatctgaggctgttggtgaatccggcggacaccgtcagc
ctgctgcgggtgatcaatgtgcccaaacggggcatcggcaagaccacgattcagcggctc
accgatgccgccaatcaactggggatcccgctctgggatgtggtgagtgatgccgaagcc
gtgcgatccctggggggacggtcggcccgtggtctgctgcagttctgcgagctgctccat
gacctgcggcgtcaggtgcaggaggtggctccgtccgagctgatccagcaggtgatggag
aaaagcggctacatcagcgaactgatcgcggaaggcaccgatgaagcggaggaacgccgc
cgcaacctgcaggaattggtcaatgccgctcttcagtaccaggaggagaacgaggagggg
gatctcgaaggcttcctggctacggcagcgttgtccagcgatgccgacagcaaggacacc
gcagcggatcgggtcaccctgatgactttgcacagcagcaagggcctggagttcccggtg
gtgtgtctggtgggtttggagcagggcctgttccccagctaccgctccctcgatgatccg
gcctccctggaggaggagcgtcgcctctgctatgtcggcatcactcgcgccaaggagcgc
ctgtttctctcccatgccagtgagcgtcggctctggggtggcatgcgcgaagccgccgtg
ccgtcggtatttctttcagagctgccggaggccctggtgcagggggatctcccccagagc
ggtggagcggccctgcgccgcgaacggcggctggagcggctcacccgtgtggatcgtgat
cgtcccagctcggcgccggccaatgcggtgcgccgccgccaggcgggtccggcccccggg
cgcagctggagcgttggtgatcgcgtcacccatgccagcttcggggtcggcgagatcact
cacaccttcggtagtggtgagaaggtgtcgatcgcggtgaagttcgctgggatgggcccg
aagatcctcgatccgcggttggcgccgatcgagccgattgctgccgatggctga
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