Parasynechococcus marenigrum: SYNW0188
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Entry
SYNW0188 CDS
T00144
Name
(GenBank) possible polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNW0188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syw03019
]
SYNW0188
Enzymes [BR:
syw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SYNW0188
Messenger RNA biogenesis [BR:
syw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SYNW0188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
Motif
Other DBs
NCBI-ProteinID:
CAE06703
UniProt:
Q7U9R5
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All DBs
Position
187376..188587
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AA seq
403 aa
AA seq
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MDLPAVPSALLDALKAAATEAGVPRLALVGGVVRDLLLHQRHGRPWTGVPDLDWVVEGSA
AHLADVLQERCGTERVSGVQHHGQFGTVALNLDGVPLDLATARQEHYPRPAENPVVQPGS
LAADLVRRDLTINAMALDLMSGELIDLHGGQSDLAAGRLQFLHPGSISDDPTRVIRAARY
GARLGIDLGSEALEQVGATVAAWPWAWHVGNAPETAPPALASRLRMELERLLDHEPWPIA
LDLLESWQAMALVDPCLQRDPERTRRLRWGQRLGLPLMTALLAAAADPGAVARRLQIPGE
QQQWLERLPSLQGWLGSHPLPIHASPDAWTTALERGGWPPQTVALMVTLRPAAWRPLLRW
WGRWRHIPSPQSARQLIAEGWQPGPGLGEELRRRRGVLLDQGR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggatctgccggctgtgccgtcagccctgctggatgccctcaaggcggcagccaccgaa
gccggtgtgccgcgtctggcgctggtggggggtgtggtgcgggatttgctgctgcatcaa
cgccatggccgtccctggactggcgttcccgatctggattgggtggtggagggcagcgcc
gcccatctggcggatgtgctgcaagagcgttgcgggactgaacgggtgagcggtgttcag
catcacggtcagttcggcacggtggccctgaacctcgatggcgtgcccctcgacctggcc
acggcgcggcaggagcactatccgcggccagcagagaaccctgtggtgcagcccgggtcg
ttggcggcggatctggtgcggcgtgatctcacgatcaatgccatggccctcgatctaatg
tccggggagttgatcgatctccacggcggccagagcgatctggccgcaggccgtctgcag
tttcttcatcccggcagcatcagcgatgaccccacccgggtgatccgggctgcgcgttat
ggcgctcggttggggattgacctgggttccgaggcccttgaacaggtgggtgcgaccgtc
gcggcctggccctgggcctggcatgtggggaatgcgccggagacggcaccgccggccctg
gccagcaggttgcggatggagctggagcggctgctggaccatgaaccgtggcccatcgcg
ttggacctgctggagtcctggcaggccatggctctggtggacccctgcttgcagcgtgat
cccgaacgaacccgacgtctgcgttgggggcaacgcctcgggctgccgctgatgacggcg
ctgttggcggctgcggctgatccaggggctgtggcgcgccgcctgcagattcccggcgag
cagcagcaatggttggaacggctgccatcgctgcagggctggttggggtcgcatccactg
cccatccatgcatccccagatgcatggacgacagcacttgagcgcggtggttggccgccg
cagacggtggcgctgatggtgacgctgcggcctgcggcgtggaggccacttctgcgttgg
tggggccgctggcggcacattccgtcgccccagagtgcgcgccagttgatcgctgaggga
tggcaaccgggaccaggtctgggtgaggaattgcgtcgccgtcgcggcgtgctgctggat
caggggcgatga
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