Parasynechococcus marenigrum: SYNW0193
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Entry
SYNW0193 CDS
T00144
Name
(GenBank) putative multidrug efflux ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
syw
Parasynechococcus marenigrum
Pathway
syw02010
ABC transporters
syw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYNW0193
03070 Bacterial secretion system
SYNW0193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syw02000
]
SYNW0193
02044 Secretion system [BR:
syw02044
]
SYNW0193
Transporters [BR:
syw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SYNW0193
Secretion system [BR:
syw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SYNW0193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
AAA_21
DUF87
AAA_30
nSTAND1
RsgA_GTPase
Zeta_toxin
L27_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CAE06708
UniProt:
Q7U9R0
LinkDB
All DBs
Position
193857..196775
Genome browser
AA seq
972 aa
AA seq
DB search
MTQSPPFPLLKHPAFKGVSDAALLRLQDSSSLLRFELGQQLCEPDDIPARILVLLQGQAR
LVGRHNGRLTTVGKFGPGSLIGAASLLCGSPCENVIASDEVIACAISDEQWTQLYSEEES
FRQWCDQQLWPQELLALLEVLEEGTAETDSSALEKLEQALKSVKRCLPDAEAIDAALATG
GRLYLTSCWGHASLGQSIQAVSDIPDSDRFRQRLVLFPGLSADSAEKEPGGDLVPANAVK
KAELLPPVSRYSPERNVVDSLRLIRAEGPIQETLACFQMLAQLMKLPFRRDSIEKVLQDN
LRRGLTPNLQLCGQLAASLGLHVMAAKVPSVSGTRLQVPSMLPWKQGFALVVASSEQGLR
LASPKHGMVTVAPDQLAESFPEGIELLLMERSNATPDQKFGPGWFWPALKRYRGVLIQVL
AASFVVQLFTLANPLLIQVIIDKVISQRSLDTLQVLGIALVMVTILEGVLGSLKTFLFAE
TTNRIDQRLGAEVIDHLLRLPLGYFDRRPVGELGTRVAELEKIRNFLTGQALTTILDAAF
SVIYIMVMVIYSWLLTLIALSVLPIQIGLTVLGAPLFRRQFRAAAEENAKTQSHLVEVLT
GIQTVKAQNVEMVSRWRWQEFYSQYIARTFEKTITGTALNQTSQVLQKISQLMVLWIGAS
MVLSGDLTLGQLIAFRIISGYVTQPLLRLSTIWQNIQELRVSFERLADVIDTPEESDEVD
KSKVMLPPLHGEVRFEGLSFRFRPGQPEVLKDINLEIKAGTFVGIVGQSGSGKSTLMKLL
PRLYEPGEGRILIDGYDIAKVELYSLRRQIGIVPQDPLLFSGTVSENIALTNPEASSEEI
VRAARLANAHDFIMDLPSGYSTPVGERGASLSGGQRQRVAIARTLLSNPKLLVMDEATSA
LDYETERKVCDNLLENLDDQTVFFITHRLSTIRQADVIVMLHQGAVVEVGTHEDLMKHRG
RYYALYRQQEST
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtcccctcccttccccctgctgaagcaccctgctttcaagggcgtatctgat
gctgctttgttgcggctgcaggactcttcgagcctgctgcggttcgaactgggtcagcag
ctgtgtgagccggatgacatcccggccaggatcctggttctgctccaaggtcaggcacgt
ctggtggggcgtcacaacggtcgcctcaccaccgttggcaagttcggcccgggcagcttg
atcggtgccgcaagcctcctgtgcggtagcccgtgcgaaaacgtgattgcatcggatgaa
gtgatcgcctgtgcgatctccgatgagcagtggactcagctgtacagcgaggaagaatcc
ttccgccagtggtgtgatcagcagttgtggccccaggagctcctcgcgctgctggaggtc
cttgaggagggaacagcggaaaccgacagctcagctctcgagaaactggagcaggctctg
aagagcgtcaagcgttgtctgccagacgcggaggcgattgacgcagctctagcgacggga
ggtcgtctttatctcacaagttgctggggacacgcctccttagggcagtcgatccaagcg
gtgtctgacattccggattcggatcggttccgtcaacgcctggtgttgtttcccggttta
tcagcggacagcgctgagaaggagccgggcggcgatctcgtgccagcgaatgctgtgaag
aaggctgaactgctgcctccagtcagtcgttacagccctgagcgcaatgtggtggacagc
ctgaggctgatccgtgctgaaggcccgatccaggaaacgctggcctgcttccagatgctg
gcccaattgatgaagctgccgtttcggcgcgattcaattgagaaagtgctgcaggacaac
ctgcggcgtgggctgacgcccaatcttcagctctgcggccaattggcggccagcttgggt
ctgcacgtcatggcagccaaggtgccttccgtatcaggcacccgcctccaggttccatcg
atgcttccctggaaacagggttttgctctggtggtggccagcagcgaacagggcctgagg
ctcgcttcgccgaaacacggcatggtcacggttgctcccgatcaattagctgaaagtttc
cctgaggggatcgagctgcttctgatggagcgctccaatgccacccctgatcagaagttc
ggtcctggctggttctggcctgcgctcaagcgctaccgcggggtgctgattcaggtgttg
gccgccagttttgtggtgcagctgttcaccctggccaaccccctgctgatccaggtgatc
atcgacaaggtgatcagccaacgcagtctggacacgttgcaagtgctgggcattgccctg
gtgatggtgaccatcctggaaggggtgctgggcagcctaaaaacgttcctcttcgccgaa
accaccaaccgcattgatcagcgcctcggtgccgaagtgatcgatcacctgctgcgtctt
ccccttggctatttcgatcgccgcccggtgggtgagctcggcacccgggtggctgagctg
gaaaagatccgcaacttcctcacgggtcaggcgctcaccacgatcctggatgccgccttc
tcggtgatctacatcatggtgatggtgatctacagctggttgctgaccttgatcgcccta
tctgtgttgccgattcagatcggtctcaccgtgctgggagctccgctgttccgccggcag
ttccgtgctgctgctgaagaaaatgccaaaacccagagccatctggttgaggttctcact
ggtattcagaccgttaaggctcagaacgtggaaatggtcagccgttggcgctggcaagag
ttctactcgcaatacatcgctcgcacgtttgagaagacgattaccggtacggctctgaat
caaaccagccaggttctgcagaagatttcgcagctgatggtgctgtggatcggagcctcg
atggtgttgagcggtgacctcaccctgggccagttgatcgccttccggatcatttctggc
tacgtgactcagccactgctgcggttgtcgacgatctggcagaacatccaggaactacgg
gtgagtttcgagcgtcttgctgacgtgatcgacaccccggaggaatccgatgaggtggat
aagtcaaaggtgatgttgccgccgttgcacggggaggtgcggttcgagggtctttccttc
cggttccgacctggtcaacctgaggtgttgaaggacatcaacctcgagatcaaggccggc
acgttcgttggaatcgttggccagagcggcagtggcaagagcaccctgatgaagctcctg
ccgcgtctttatgagccgggagaaggcaggattttgatcgatggctacgacatcgccaag
gttgagctttattcactgcgccgacagattggaatcgttccccaggacccactcctgttc
agcggaacggtgagcgagaacattgctctcaccaatccggaagcgtccagtgaggagatt
gttcgggcagcccgcctggccaatgcccacgacttcatcatggatctgcccagtggctac
agcactcctgtgggtgaacggggggcttccctcagtggcggccaacgtcaacgggtggcg
atcgcgcggaccttgctgagcaatcccaagttgctggtgatggacgaagccacgagcgcc
cttgattacgaaacggagagaaaggtctgcgacaacctgctcgagaatctggatgaccag
acggtgtttttcattacgcaccgcctgtccacgatccgtcaggccgatgtgatcgtgatg
cttcaccaaggtgccgtggtcgaagtcggcacccatgaggacctgatgaagcatcgaggt
cgctactacgccctttatcgccagcaggagagcacctga
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