Parasynechococcus marenigrum: SYNW0219
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Entry
SYNW0219 CDS
T00144
Name
(GenBank) probable deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW0219
Enzymes [BR:
syw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SYNW0219
DNA repair and recombination proteins [BR:
syw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SYNW0219
Prokaryotic type
SYNW0219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
CAE06734
UniProt:
Q7U9N5
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All DBs
Position
219192..220625
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AA seq
477 aa
AA seq
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MTTPRVLFWHRRDLRLTDNLGLAAAAAISPAVTGVYVLDPQVISPSEHLLPMAPARLWFL
IESLIELQQRWRDAGSRLLVVEGDPVQLLPQLAERIAAEAVVWNRDVEPYARERDRQVAQ
RLQADGRKVVVDWDQLLIAPELLKTGGGDPYRVYGPFLRNWRGQVQAKQPVTVPAPAGLV
DLDPAAVPSGEPLMARRDSHGFKGTELCPCRPGEAAAMQQLTSFCDGALFGYEPDRNFPG
VVGTSYLSAALSVGTLSPRQAWSAAQEAREQARSEEQLHAIAVWEQELCWREFYQQALFH
FPELSDGPYREQWRRFPWENNEDWFDFWREGQTGMPIIDAAMRQLNQTGWMHNRCRMIVA
SYLVKDLICDWRWGERAFMELEVDGDLAANNGGWQWSASSGMDPKPLRIFNPATQASKFD
AAGDYIRQWVPELRHVNTKDLLSGEIGALERRDYPEPLVNHKTQQAKFKALYATIRS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgccacgcgttctgttctggcaccggcgtgatctccgcctgacggacaacctc
ggtttggctgctgctgcagcgatcagccccgccgtcactggtgtctatgtgctggatccg
caggtgatctccccttcggagcatctgctgccgatggctccggctcgattgtggtttctg
atcgagagcctgattgagctgcaacagcgctggcgggatgccggcagtcgactgctagtt
gtggagggcgatcctgtgcagctgctgccgcagttggcggagcggattgctgccgaggcg
gtggtgtggaaccgggatgtggagccctatgcccgtgaacgggatcgtcaggtggctcag
cggctgcaggcggatggccgcaaggtggtggtggattgggaccagctgctgattgccccg
gagctgctcaagaccggcggaggagatccctatcgcgtttatggcccattcctgcgcaac
tggcgcggacaggtgcaggccaaacagcccgtcactgttccagcaccggcgggcctcgtt
gatctcgatccggccgccgtgccatcgggcgaacccctcatggcacggcgggacagccat
ggtttcaaggggaccgagctctgcccctgccgtcccggcgaggcggcggcgatgcagcag
ctcaccagcttctgtgatggcgccctgttcggttacgaaccggaccgcaacttccctggc
gtcgtcggtacctcgtacctcagtgccgcgttaagcgttggcaccctcagcccacgccag
gcctggtctgcagcccaggaggcccgtgagcaggcccgcagcgaagagcagcttcacgcc
attgctgtttgggagcaggagttgtgctggcgcgagttctaccaacaggccctgtttcat
ttccccgaattgtcggatggtccctaccgcgagcagtggcgccgcttcccctgggagaac
aacgaagactggttcgatttctggagggagggtcagaccggcatgccgatcattgacgcc
gccatgcgccagctgaaccagaccggttggatgcacaaccgctgccgcatgatcgtggct
tcgtacctggtgaaggatctgatctgcgactggcgctggggggagcgcgccttcatggaa
ctggaggtggatggcgatctggccgccaacaacggtggctggcagtggagcgccagcagt
ggcatggaccccaagcccctgcggatcttcaaccccgccacgcaggcctcaaagtttgat
gcagccggcgattacatccgccagtgggtaccggaactgcgccatgtgaacaccaaggac
ctgctcagtggtgagatcggtgctcttgaacggcgcgactatcccgaaccattggtcaat
cacaaaacccagcaggccaaatttaaggcgctttacgccaccatccgctcctga
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