Parasynechococcus marenigrum: SYNW0424
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Entry
SYNW0424 CDS
T00144
Name
(GenBank) Possible HMGL-like family protein
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw00360
Phenylalanine metabolism
syw01100
Metabolic pathways
syw01120
Microbial metabolism in diverse environments
syw01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
SYNW0424
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SYNW0424
00622 Xylene degradation
SYNW0424
00621 Dioxin degradation
SYNW0424
Enzymes [BR:
syw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
SYNW0424
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GFIT
Motif
Pfam:
HMGL-like
MptE-like
Motif
Other DBs
NCBI-ProteinID:
CAE06939
UniProt:
Q7U935
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Position
427233..428855
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AA seq
540 aa
AA seq
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MSNERTFKILDCTLRDGGYYNNWNFSDELIENYVRASLAAKIDVIEIGFRSSLNNKFKGA
CAYSSDLFLENLPFLNGTDIAVMVNGSEICRTDSIPRLLEKLFPKPAISSIVSIVRIACH
FSELSRVLSATRWLADHGYKICINIMQISDRKYADIKEITSMASDCPIDVLYFADSTGSL
KPDDISRIVEWFRTGWQRELGIHTHNNMGIALQNTLRAYEEGVNWLDSTVSGMGRGPGNA
KTEELVIETETLRDGNVNYVPLMALSRQKFDKLKAQYGWGPHPYYYLSGKYGIHPSYIQE
MINDARYDDEDIIAVTNQLKSEGGKVFSLDSLDLARQFYIDKANGSWSPTEIFNGREVLI
LGSGPGVREHSSALELYIQKQSPLVLALNTQSAIDSSLIDLRIACHPVRLIADVEEYNQL
AEPLIIPVSSLPKSLRNELANKKVFDYGLGISANKFQCNNTYCIIPSPLVLAYALAVATS
GKSKNILLAGFDGYAPGDPRNEEIENIFLTYFNSYPNALLHSITSTNFKTIASKSLYGMF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaaagaacctttaaaattttagattgcaccctccgtgatggcggatactat
aataactggaactttagcgatgagttaatagaaaattacgttcgtgccagtttggctgcc
aagattgatgttatagaaattggattccgatcttctttgaataataagttcaaaggggca
tgtgcatatagttcagatttatttctagagaatttacctttcttgaatggtactgatatc
gctgtgatggttaacggatctgagatctgtagaactgattctataccgcgcctattagaa
aaactttttccgaagcccgccatatcatcaattgtttcaatagttcgtattgcatgccat
ttttcagaattatctagagttttatctgctacacgatggcttgcggatcatgggtataag
atatgcatcaatataatgcaaatatcagatcgaaaatacgctgatattaaggaaataaca
tcaatggcttctgattgccccattgatgttctttatttcgctgactcaaccggatcgctg
aagccggatgacatctctagaattgtcgaatggttccgtactggttggcagagagaactc
ggtatacatacccacaacaatatgggaattgcacttcaaaatactttacgtgcttatgaa
gagggtgttaattggttggattcaactgtgagtggtatgggcagaggtccaggtaatgcg
aaaacagaagaacttgtcatagaaactgagactttacgcgatggcaatgtcaattacgtg
ccactgatggctctaagtagacagaaatttgataaactcaaagctcagtacgggtgggga
cctcatccatattattatttgtctggcaagtatggtatacatccaagttatattcaagaa
atgattaatgatgctcgttatgacgacgaagacatcattgcagtgacaaatcaattaaaa
tctgaaggaggcaaagtttttagtcttgattctttagacctcgcacgtcaattttatatc
gacaaagcaaatggatcttggtcaccaactgaaatatttaatggtcgagaagtactgatt
ttagggtctggcccaggggttcgtgaacattcatctgccctagaactatatatacaaaag
caatcacctcttgtacttgcactcaatacacagtcagcaatcgattcgtctttgattgat
cttagaattgcctgtcaccctgttcgcctaatagctgatgtagaggaatacaatcaacta
gccgagccattaattatcccagtttcttcactaccaaaatctttaagaaatgaattggcc
aataaaaaagtttttgattacggcttaggtatatccgcgaataagtttcaatgcaataat
acgtattgcattattccctcacctctggttctcgcttatgcgctagctgttgctacaagt
ggtaagtcaaagaacattcttttggcaggctttgacggttatgctccaggtgatccaaga
aatgaagaaattgaaaatatatttttaacttattttaattcatatcctaatgctttactc
cattcgataacttcaacgaattttaagaccatagcttctaaaagcttatatggaatgttt
tga
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