Parasynechococcus marenigrum: SYNW0538
Help
Entry
SYNW0538 CDS
T00144
Name
(GenBank) conserved hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syw03016
]
SYNW0538
Enzymes [BR:
syw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SYNW0538
Transfer RNA biogenesis [BR:
syw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SYNW0538
Prokaryotic type
SYNW0538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CAE07053
UniProt:
Q7U8S4
LinkDB
All DBs
Position
complement(530383..531342)
Genome browser
AA seq
319 aa
AA seq
DB search
MQVTFLGTSSGVPTRARNVSAVALRLPQRSEMWLFDCGEGTQHQFLRSDLRLSQLRRVFV
THMHGDHVFGLPGLLASLGLSGSCQDGVDLYGPDPLESFLKGALNTSSTRIGYPLQVHRS
RPAAEQGTLLFEDDELTVRCTPLTHRVPAYAYRVDQKPLAGRFDIDKARSLGIPPGPVYA
QLKRGESVTLEDGRVIDGTTLCGPERPGVSVMICTDTVFCDAAVELARGVDLLIHESTFA
HAEAEMAFQKQHSTSTMAAQTAAEAGVGQLAITHLSPRYVPGNPVSPDDLLKEAQAIFPN
TVLAKDFLSLDVKPCCNSS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtcacctttctcggtaccagttccggagtgcccacgcgggcgcgcaacgtctcc
gccgtggcgctgcgtctgccccagcgatcggagatgtggctgttcgactgtggcgagggc
acccagcatcagtttctgcgcagcgatctgcgcctgtcgcagctgcggcgggtctttgtc
acccacatgcatggtgatcacgtcttcgggctgccgggattgctggccagcctgggattg
tccggctcctgccaggacggggtggatctctacggccctgacccgctcgagtcgtttctg
aagggtgcgctgaacaccagctccacccgcatcggctatccgcttcaggtgcaccgctca
cggccggcggctgagcagggaacgctgctgttcgaagacgacgagctcaccgtgcgctgc
acccccctgacccaccgggtgcccgcttacgcctaccgggtggaccaaaagcccctggcg
ggtcggttcgacatcgacaaagcccggtccctcggcattccgccagggccggtgtatgca
cagctgaagcggggggagagcgtcaccctggaggacggccgcgtgatcgacggcaccacc
ctctgcggaccggagcgaccgggggtgagcgtgatgatctgcaccgacaccgtgttctgc
gacgccgccgttgagctggcccgaggcgtggatctgctcatccatgaatcgaccttcgcc
cacgctgaggcggagatggccttccagaaacagcactccaccagcaccatggcggcccag
accgcagctgaagccggggtgggacagctggcgatcacccatctcagtccccgttatgtg
ccgggcaacccggtcagccccgacgacctgttgaaggaagcgcaggcgatcttccccaac
acggtcctggccaaggacttcctcagcctggatgtgaaaccctgctgcaacagttcgtga
DBGET
integrated database retrieval system
