Parasynechococcus marenigrum: SYNW0544
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Entry
SYNW0544 CDS
T00144
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syw03016
]
SYNW0544 (truB)
Enzymes [BR:
syw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SYNW0544 (truB)
Transfer RNA biogenesis [BR:
syw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYNW0544 (truB)
Prokaryotic type
SYNW0544 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
DEC-1_N
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CAE07059
UniProt:
P59884
LinkDB
All DBs
Position
complement(534926..535801)
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AA seq
291 aa
AA seq
DB search
MDGPFGFVVIDKPAGHTSHSCVSRLRRCYGLKRVGHGGTLDPAVTGVLPIALGPATRLLP
YLPGDKTYRGVIQLGSITSSDDLEGELLRQAPWPDLQPEELEVALAPFRGPIQQRPPQVS
AVHVDGERAHARARRGEQMVLPPRPVTIHRLQLLHWDPNQGQLTLEVHCSAGTYIRSLAR
DLGEQLGCGGCLAQLRRTQALGFLESQAQALPEADATPPPPLSPLLALEHLPRRQLTDSE
EADWRCGRRLSLDPGPGDAVVVCNADGSMAGIGLRQEDDQLQPKVVFDASG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ttggacggccccttcggcttcgtggtgatcgacaaacccgccggccacacctcccacagc
tgcgtcagccgtctacggcgctgctatggcctcaaacgggtgggccacggcggcaccctg
gaccctgcggtgacaggggttctgccgatcgccctcggccccgccacgcggttgctgccc
tacctccccggggacaagacttaccggggggtgatccagctcggcagcatcaccagcagc
gacgacctggagggggagctgctgcgccaggccccctggcccgacctccagcccgaggag
ctggaggtcgcccttgccccgttccgtggcccgatccagcaacgccctccccaggtatcg
gccgttcatgtggacggcgaacgggcccacgcccgcgcccggagaggggaacagatggtc
ctgccgccgcggccggtgaccatccatcgcctccagctgttgcactgggaccccaaccag
ggacagctgaccctggaggtgcactgctccgccggcacctacatccgctccctcgccagg
gatctcggcgagcaactgggctgcggaggctgcctggcccagctgcgccgcacccaggcc
ctcggcttcttggaatcccaggcccaggccctgccggaggcggacgccacaccaccgccc
cccctgtcaccgctgctggccctggagcacctgccccgccgtcagctcactgacagcgag
gaggccgactggcgctgcggccggcgactcagcctggacccaggcccaggcgacgccgtg
gtggtctgcaacgccgacggcagcatggcgggcatcggcctgcgccaggaggacgatcaa
ctgcagcccaaggtggtgtttgatgccagcggctag
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