Parasynechococcus marenigrum: SYNW0646
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Entry
SYNW0646 CDS
T00144
Symbol
rfbB
Name
(GenBank) dTDP-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw00521
Streptomycin biosynthesis
syw00523
Polyketide sugar unit biosynthesis
syw00525
Acarbose and validamycin biosynthesis
syw00541
Biosynthesis of various nucleotide sugars
syw01100
Metabolic pathways
syw01110
Biosynthesis of secondary metabolites
syw01250
Biosynthesis of nucleotide sugars
Module
syw_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SYNW0646 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SYNW0646 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SYNW0646 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SYNW0646 (rfbB)
00525 Acarbose and validamycin biosynthesis
SYNW0646 (rfbB)
Enzymes [BR:
syw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SYNW0646 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CAE07161
UniProt:
Q7U8H2
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Position
complement(633110..634177)
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AA seq
355 aa
AA seq
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MTNSMPTAAELLGSRRRVLVTGGAGFIGGAVVRRLLKESEAIVFNLDKMGYASDLTSIEA
VLSELGDGAKQRHQLQRVDLADAKAVREAVKAADPDLVMHLAAESHVDRSIAGPGVFIES
NVTGTYNLLQAVREHVEGLSGERQENFRLHHISTDEVFGSLGAEGRFSETTPYDPRSPYS
SSKAASDHLVSAWHHTYGLPVVLTNCSNNYGPWQFPEKLIPVVTLKAAAREPIPLYGDGL
NVRDWLYVEDHVDALLLAACKGASGRSYCVGGYGERTNREVVECICSHLDQLKPDGAPHA
RLITRVTDRPGHDRRYAIDPTRIETELGWKPRHDFDEAIAKTVQWYIAHYGDKKL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattcaatgccgactgctgcagagctgctgggatcccgacggcgggtactggtg
acaggaggtgctggatttatcggtggggccgtggtgcggcgcctgctcaaggagagcgag
gcgatcgtgttcaacctcgacaagatgggctacgccagcgatctgacctcgattgaggcg
gtgctgagcgagctcggagatggagcaaagcagcgccatcaactgcaacgggtggacctt
gcggatgcaaaggctgttcgtgaggcggtgaaggcggcggatcccgacctggtgatgcac
ctggcggccgaaagtcatgtggaccgctcaattgcaggccctggtgtgttcatcgagagc
aacgtgacagggacctacaatctgctgcaggctgtacgggagcatgtcgagggcttgagc
ggagaacgccaagagaacttccgcctgcatcacatcagcaccgatgaagtcttcggctcc
ctgggcgcagagggtcgtttttcagagacgacgccttacgacccgcgaagtccatattcc
agcagcaaggcggccagtgaccatctagtgagcgcctggcaccacacctatggattgcca
gtggtgttgacgaattgctccaacaattacggaccttggcaatttcccgaaaagttgatt
cctgtcgtgacgttgaaagctgctgccagagagccaatccccttgtatggcgatggattg
aacgtcagagactggttgtatgtggaagaccacgtcgatgccctgctgctcgccgcatgc
aaaggagcatcaggccgcagttactgtgtcggtggatatggagaacgaaccaatcgtgag
gtggtggagtgcatctgcagccacttggatcagctaaaaccggacggagcaccccatgcg
aggttgatcacacgagtgacggatcgtcccggccacgaccgtcggtatgccattgatccg
actcggattgagaccgagctggggtggaaaccaaggcatgatttcgatgaagccatcgca
aagaccgtgcagtggtacatcgcacactacggcgacaaaaaactgtag
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