Parasynechococcus marenigrum: SYNW0685
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Entry
SYNW0685 CDS
T00144
Name
(GenBank) possible pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syw03009
]
SYNW0685
Enzymes [BR:
syw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SYNW0685
Ribosome biogenesis [BR:
syw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SYNW0685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAE07200
UniProt:
Q7U8D6
LinkDB
All DBs
Position
complement(669941..670618)
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AA seq
225 aa
AA seq
DB search
MEGSRKRRLTTLLFNKPYGVLSQFTPETASRWRCLAEFINVPGVYAAGRLDADSEGLLLL
SDQGRLQQRLTDPRCGHWRSYWVQVEGHPDDPQLQKLREGIEIQHQRTLPARARWLQGED
IPLLPERDPPIRVRATIPTSWLELSLREGRNRQVRRMTAAVGLPTLRLVRCRIDLMDGGK
ALDLNDLPAGRWRSVTNAEQERLNRLLSSRVPRPRSAGRGADRRG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggagggctcgcgaaaacgccggttgaccaccctgctgttcaacaagccctacggggtc
ctcagtcagttcacccctgaaacggcaagtcgctggcgatgcctggctgaattcatcaat
gttcctggcgtctacgccgcaggtcggctggatgccgacagcgagggattgctgctgctg
agcgatcagggtcgcctgcagcaacggctgaccgatccgcgttgcgggcactggcgcagc
tattgggttcaggtggaaggtcacccggacgacccgcagttgcagaaactgcgggaggga
attgagatccaacaccagcggaccctgccggcacgggcgcgctggctgcagggcgaggac
attccgttgctcccagaacgggaccctccgattcgggtacgcgccacgattcccaccagt
tggcttgagctgtccctgcgggaggggcgcaaccgccaggtgcgccggatgaccgccgcg
gtggggcttccaaccctgaggctcgttcggtgccggatcgacctgatggacggcgggaaa
gcgttagatctgaacgatctaccggcagggcgttggcggtcggtgaccaacgctgagcag
gagcgcctgaaccgtctgctcagcagcagggtgccccgaccacggagtgctggccgggga
gctgaccgacgagggtga
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