Parasynechococcus marenigrum: SYNW0727
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Entry
SYNW0727 CDS
T00144
Symbol
gyrA
Name
(GenBank) DNA gyrase A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syw03032
]
SYNW0727 (gyrA)
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW0727 (gyrA)
Enzymes [BR:
syw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SYNW0727 (gyrA)
DNA replication proteins [BR:
syw03032
]
Prokaryotic type
DNA Topoisomerases
SYNW0727 (gyrA)
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SYNW0727 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAE07242
UniProt:
Q7U895
LinkDB
All DBs
Position
708691..711318
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AA seq
875 aa
AA seq
DB search
MADSVGPGGGGPGDSDDRIIQADLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRIL
YAMYELGLTSDRPYRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMSMPLIDGHGNF
GSVDNDPPAAMRYTESRLQALTTDSLLEDIEAETVDFADNFDGSQQEPTVLPARIPQLLL
NGSAGIAVGMATNIPPHNLNELINGLLALIENPDLTDQELVRLIPGPDFPTGGQILGREG
IRETYLGGRGSITMRGVAAIETIEAPGRPDRDAVIITELPYQTNKAGLIERIAELVNDKK
LEGISDIRDESDRDGMRIVVELRRDAYPQVVLNNLFKLTALQSNFSAYMLALVNGEPILL
TLRKMLEVFLDFRVETIERRTRYLLRKAEERDHILLGLLLALDQLDPIIALIRAAPDTAT
ARQQLQDRHGLSDIQADAILQMQLRRLTALEADKIRLEHEDLVTKIADYKDILGRRERVF
GIIQDELNQLSDRYTTPRRTEILDLGGGLEDIDLIANERSVVLVTETGYLKRMPVSEFEA
TSRGTRGKAGTRSQGEEAVKLFISCNDHDTLLLFSDRGVSYALPAYRVPQCSRTAKGTPV
VQLLPIPREEAITSLIPVSEFNDDMDLLMLTRGGFIKRTRLSAFSNIRSNGLIAINLEEG
DALRWVRLAVPGDSVLIGSNAGMTIHFRLSDEELRPLGRTARGVRSMNLREGDGLVSMDV
LPVELADRIAQSAEDDEEDDASSGDGPWVLVASASGLGKRVPVTQFRLQKRAGMGLRAMK
FRTTDDALVGLRVLGAGEEVLLVSEKGVIVRTSADAIPQQSRAATGVRLQRLDKGDRLSE
VVLVPPEAEDDTTATDDTNADDTETSDTESSAQDS
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgtggggccaggaggcggcggtcccggcgattccgacgatcgaatcatt
caggcggatcttcgcaacgagatgtcgcgctcctatctggagtacgcgatgagtgtgatc
gtgggccgggcgttgcccgatgcccgcgatggcctaaagcccgtgcatcgccggatcttg
tacgcgatgtacgaattggggctgaccagcgatcgcccttacaggaaatgcgcccgtgtg
gtgggcgaggtgctgggtaaataccacccccatggcgatacggctgtgtacgacgccctg
gtgcggatggcccaggacttttcgatgtcgatgccgttgattgacgggcacggcaatttc
ggatcggtggacaacgatccgccggcggccatgcgatacaccgagtccaggttgcaggcg
ctgaccaccgacagcctgctggaggacatcgaggccgagaccgttgatttcgccgataac
ttcgatggttcgcagcaggagccgacggtgcttccggctcgaattccccagctgctgctg
aatggttcagcgggcattgccgtggggatggcgaccaacatccccccccacaacctcaat
gagctgatcaacggtctgctggcgctgattgagaaccctgatctcacagatcaggagttg
gtccggctgattcctggacccgacttcccaacaggtggtcagatcctgggtcgcgagggc
atccgtgagacctatctgggcggtcgtggctcgatcaccatgcgcggtgtggcggcgatt
gagacgatcgaagcccccggccgtcctgatcgtgatgccgtgatcatcacggagttgcct
tatcagaccaacaaggctggcctgatcgagcgcatcgccgagctggtcaacgacaaaaag
cttgagggtatttctgatatccgcgatgagagcgatcgcgacggcatgcgcatcgtggtg
gagctgcgccgtgatgcctatccgcaggtggtgctgaacaatctgttcaaactcactgcc
ttgcaaagcaacttcagtgcttacatgttggcgctggtgaacggtgagccgatcctgctc
accctgcgcaagatgctcgaggtgtttctcgactttcgtgtcgagaccattgagcgccgc
acccgttatctgctgcgcaaggccgaggaacgcgatcacatcctgctgggcctgctgttg
gcccttgatcagctggatccgatcattgccctcatccgggctgcgcctgacacggctacg
gcccgtcagcagctgcaggaccgtcatggcctcagcgacattcaggccgacgccatcctg
cagatgcagctgcggcgtctcacagcgttggaggccgacaagatccggcttgagcacgag
gatctggtcaccaaaatcgcggattacaaagacatcctcggccggcgtgagcgggtgttc
ggaatcattcaggacgaactcaaccaactcagcgatcgctacacgacaccgcgccgaacc
gagattctcgatctgggtggtggtcttgaggacatcgatctgatcgccaacgagcgttcc
gtggtgctcgtcaccgaaaccggttacctgaaacggatgccggtgagtgagttcgaagcc
accagtcgaggcacccgcggcaaagctggcacccgcagccagggagaggaggccgtgaag
ctgttcatcagctgcaacgaccacgacacgctgctgctgttcagtgatcggggtgtttcc
tatgcccttccggcttaccgggtgccgcaatgcagccgcaccgcaaaaggcacaccggtg
gtgcagttgttgcccatccctcgggaggaagcaatcacctcgttgattcccgtgtcggaa
ttcaacgacgacatggacttgttgatgctgacccgaggcgggttcatcaagcgcacccgt
ctttcagccttcagcaacattcgctccaatggtctgatcgctatcaacctggaagagggg
gatgcattgcgttgggttcgtctggcggtgcccggcgacagcgtgctgatcggctccaat
gcggggatgacgattcactttcgcctcagtgatgaggagctgcgcccattaggccgcacg
gcccgtggtgtgcgttcgatgaacctgcgcgagggcgatggactggtgagcatggatgtc
ctgccggttgagctggcggatcggatcgcccagagtgcagaggacgatgaagaggatgat
gcatcctctggtgatggtccctgggtgttggtggcctcggcatctggattgggcaagcgt
gtgccggtgacccagttccgactgcagaagcgggctggcatgggcctgcgggcgatgaag
ttccgcacgacggatgatgctctggtgggtctacgggtcctcggtgctggtgaggaggtg
ctgttagtgagcgagaaaggggtgatcgtgcgcaccagcgccgatgcgattccccagcag
tcgcgtgccgccacgggtgtgcggctgcagcgtctcgataaaggtgaccgtctttcggaa
gtggtgctggtgccgcctgaagcagaagacgacaccacagcaaccgacgacaccaacgcg
gatgacaccgaaacgagtgacaccgaaagcagcgcgcaggacagctga
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