Parasynechococcus marenigrum: SYNW0767
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Entry
SYNW0767 CDS
T00144
Name
(GenBank) possible ligand gated channel (GIC family)
KO
K02030
polar amino acid transport system substrate-binding protein
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syw02000
]
SYNW0767
Transporters [BR:
syw02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative polar amino acid transporter
SYNW0767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan
Ion_trans_2
Lig_chan-Glu_bd
Ion_trans
Stevor
IRK
Motif
Other DBs
NCBI-ProteinID:
CAE07282
UniProt:
Q7U857
LinkDB
All DBs
Position
complement(749149..750219)
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AA seq
356 aa
AA seq
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MKRSAVAVGLLLGLQFLLPPLMARTLKVGVSGSAPFVIQEEGGSSGISLQVWRRIAEDNN
LSYRLIQQATPQKGILALNDGEIDLLVGPISVTPDRLNLPGVDFTQPYFIGKEGILLPLK
PSTLLNRLQVFLGWAVLSSVLVLITVLLVVGSLIWLAERRSNSEQFPAQPLPGIASGMWF
ALVTLTTVGYGDKAPITRIGRGLTAIWMVTSLIAVSSLTASLASAFTLFLSGDTNNSITD
PAQLSGQRAAVLEGTSGAELARQRNMRIVPAKTLTAAIDHVLMNRAEAVIFDRPAIRFHL
KNNPELAVQLAPFTLAEQTYGFAFRTGDPLRTPLNISILKLQRSGAVEAISKRLLN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcggtctgccgttgcagtcggcctgctgctgggcctgcagtttctgcttccaccg
ctaatggcacggacgctcaaggtgggcgtcagcggcagtgccccctttgtgatccaggag
gagggtggcagcagcggaatcagcctccaggtgtggagaaggattgctgaagacaacaac
ctctcctatcggctgattcaacaagcaacaccccaaaagggaattcttgccctgaacgac
ggggagattgatctgctggtggggccgatcagcgtcacacccgatcgtctcaaccttcca
ggggtcgatttcacccagccctatttcatcggcaaggaaggcattctgttgccacttaag
ccctccaccctgctgaatcgattgcaggtttttctgggatgggccgtgctgtcatcggtc
ctcgtgctgatcacagtgctgctggtggtgggcagcctgatctggctggcggagcggcgg
agcaacagcgaacagtttccagcgcagcctctgccgggaatcgccagtgggatgtggttt
gcccttgtgacgttgaccactgtgggctatggcgacaaggcccccatcacccggatcgga
cgaggcctcacggcgatctggatggtcacctcgttgatcgcggtgtcttccttgacggcc
agcctggcgtccgccttcactctatttctctcgggtgacacgaataacagcatcacggat
ccagcccagctgagtggccaaagggctgccgtgctggagggaacgagcggagcggaactg
gcgaggcagcggaacatgcggatcgtgccagcaaagaccctcaccgcagcgatcgaccat
gtgttgatgaacagagcggaagcggtgatcttcgatcgcccggcaatccgctttcacctc
aagaacaacccggaactggcggtgcaactggctccattcaccctggcggagcagacttac
ggctttgccttcagaactggcgatccattgaggacaccgttgaacatctccatcctcaag
ctgcagcgcagtggagcggtggaagccatctccaaacgactgctcaattag
DBGET
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