Parasynechococcus marenigrum: SYNW0901
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Entry
SYNW0901 CDS
T00144
Symbol
crtH
Name
(GenBank) Carotenoid isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw00906
Carotenoid biosynthesis
syw01100
Metabolic pathways
syw01110
Biosynthesis of secondary metabolites
Module
syw_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SYNW0901 (crtH)
Enzymes [BR:
syw01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
SYNW0901 (crtH)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
Lycopene_cycl
GIDA
GDI
GMC_oxred_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
CAE07416
UniProt:
Q7U7T0
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All DBs
Position
863654..865210
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AA seq
518 aa
AA seq
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MSDQQHWDAVVIGSGIGGLVTASQLAAKGARTLVLERYLIPGGSGGAFKREGYTFDVGAS
MIFGFGEKGYTNLLTRALADVGEHCETIPDQAQLEYHMPGGLNIAVDRDYETFIADLSAR
FPHEATGVRRFYDTCWQVFNCLDAMPLLSLEDPAYLTKVFFKAPLACLGLARWLPFNVGA
VARQHINDEQLLKFIDIECFCWSVMPADRTPMINAGMVFSDRHAGGINYPRGGVGVIAEK
LVHGLERHGGAIRYKARVTKVLLENGEAVGVKLADGETIRAKRVISNATRWDTFSGQDDG
STRAGQALVDEANTPKKEAFWRRRYVPSPSFLSLHLGVRADLIPAGTHCHHLLLEDWNRM
EDEQGVIFVSMPSLLDPDLAPAGHHIVHTFTPSSMEAWQGLSPTDYRAKKEADAARLIQR
LEAILPGLSEAITHKEIGTPRSHRRFLGRFQGSYGPIPAMQLPGLLPMPFNRTGVPNLYC
VGDSCFPGQGLNAVAFSGFACAHRVGADLGLNPWALPA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcagcagcactgggatgccgtggtgatcggctccggcatcggcgggttggtc
accgccagccagctggcggccaagggagctcgcaccttggtgctggagcgctacctgatc
cccggcggcagtggcggtgccttcaagcgcgagggctatacctttgatgtgggcgcctcg
atgattttcggcttcggtgagaagggctacaccaacctgctcaccagggctctcgctgat
gtgggcgagcactgcgagaccattccggatcaggcccaactcgagtaccacatgcctggg
gggctcaacatcgccgttgaccgcgattatgagacgttcatcgctgatctgtccgcccgt
ttcccccacgaggccactggcgtccgccgcttctacgacacctgttggcaggtgttcaac
tgtctggatgcgatgccgttgctgtcgctggaagatccggcatacctcaccaaggtgttc
ttcaaggcaccactggcctgtctggggttggcccgctggctgcccttcaatgtgggtgcg
gtcgcccgccagcacatcaatgatgagcagctgctgaagttcatcgacatcgaatgcttc
tgctggtcggtgatgccagccgatcgcaccccgatgatcaatgccggcatggtgttttcc
gatcgccatgccggtggcatcaactacccccgtggtggtgtgggtgtgatcgctgaaaag
ctggttcatggtcttgaacgccatggcggcgccattcgctacaaagcgcgggtcaccaag
gtgctgctcgagaacggtgaggcggttggtgtgaagctggccgatggcgagaccatccgg
gccaagcgggtgatctccaatgccacccgctgggacaccttttcggggcaggacgatggc
tccacgcgggccgggcaggcgctggtggatgaagccaacactccgaagaaggaggccttc
tggcgtcgccgctatgtgccgtcgccctcgtttctctccctgcatctgggggttcgtgcc
gatctgattccagccggtacccactgccatcacctgctgctcgaagactggaaccggatg
gaggacgagcagggggtgatctttgtgtcgatgccgtcgttgctggatcctgatctggca
ccggccgggcatcacattgttcacaccttcacaccgtcgtcgatggaggcatggcagggg
ctctcccccactgattaccgggccaagaaggaggcggatgcggctcgcttgattcagcgg
cttgaggcgatcctgcctggcctcagtgaagccatcacccacaaggagatcggcaccccc
cgcagccaccggcggttcctgggtcgcttccagggcagctacggcccgattccggcgatg
caactccccggcctcctgccgatgccgttcaaccgcaccggtgtacccaacctctattgc
gtcggcgattcctgcttcccgggtcaggggctcaatgccgtggccttcagtggctttgcc
tgtgcccatcgggtgggtgcggatttgggcctcaacccctgggcactgccggcctga
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