Parasynechococcus marenigrum: SYNW0938
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Entry
SYNW0938 CDS
T00144
Symbol
clpC
Name
(GenBank) endopeptidase Clp ATP-binding chain C
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syw03110
]
SYNW0938 (clpC)
Chaperones and folding catalysts [BR:
syw03110
]
Heat shock proteins
HSP100
SYNW0938 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
TniB
Sigma54_activat
nSTAND3
AAA_14
UVR
AAA_18
Zeta_toxin
NACHT
ATPase_2
IstB_IS21
AAA_28
TsaE
ResIII
Torsin
NBD_SMAX1
AAA_25
DNA_pol3_delta2
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
CAE07453
UniProt:
Q7U7P3
LinkDB
All DBs
Position
898196..900736
Genome browser
AA seq
846 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR
VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLAKVRTQVIRMLGETAEVSGGGGGGGAKGSTKTPTLDEFGSNLTQMANEA
KLDPVVGRHNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGEIPDILEDK
RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAA
NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRER
YEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVD
KELRGVQKQKEDAVRDQDFTKAGELREKEVELRDQIRSLLQANRTDATAVAEASADQSDA
PAAESAESSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKA
VSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFME
RHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRL
TDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQ
YFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEG
YNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVDVDDDKKVVVRHKGLAESSPQ
LAGAAV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacgttttactgagaaggccatcaaggtgatcatgctggcccaggaagaggct
cggcgacttggtcacaacttcgttggcaccgaacagattcttctgggtttgatcggagag
ggcacgggtgtcgccgcgaaggttctgaagtcgatgggtgtcaacctcaaggacgcccgg
gttgaagttgagaagatcatcggccgaggttctggctttgtggccgttgagatccccttc
acgccaagggctaagcgggtgctcgaactctccctggaagaagccagacagttggggcac
aactacatcggtaccgagcatctgctgctcggtttgatacgggaaggcgaaggcgttgcg
gcccgtgtgctcgagaatctgggtgtggatctggccaaggtcagaacccaggtcattcgc
atgctgggtgaaaccgccgaagtgtccggcggtggcggtggtggtggagcaaaaggttcc
accaagacacccaccctggatgaattcggcagcaacctcacccagatggccaacgaggcc
aagttggaccccgtggtgggtcgccacaacgagattgaacgggtcatccagatcctgggt
cgccgaaccaagaacaatccggtgttgatcggcgagccgggtgtgggcaagacggctatc
gccgaaggtcttgctcagcgcatccagcagggtgaaattccggacatcctggaagacaag
cgcgtcctcacccttgatattggactgctcgtcgcagggaccaaataccgcggtgagttt
gaggagcgcctcaagaagatcatggaggagatcaaggcggccgggaacgtgatcctggtg
atcgacgaggttcacaccctgatcggtgctggtgctgctgagggcgccatcgatgcggcc
aacattctcaagccggctctcgccaggggcgagctgcagtgcatcggtgccacaaccctg
gatgagtatcgcaagcacatcgagcgtgatgctgcgctggaacggcgtttccagcccgtc
aacgtcggtgagccctccatcgatgacaccatcgaaatcctgcggggcctgcgcgagcgc
tacgagcagcaccaccgcctcaagatcaccgacgatgctcttgtggctgcggcaaccctc
ggtgatcgctacatctcggaccgcttcctccccgacaaggcgatcgacctgattgatgag
gccggttcacgggttcggctgctcaattccaagctcccacccgaggccaaggaggtggac
aaggagttgcgcggcgtccagaaacagaaagaggacgccgtacgcgaccaggacttcact
aaagccggtgaacttcgtgaaaaggaggttgagctgcgcgatcagattcgctctctgctg
caagccaaccgcaccgatgccaccgccgttgctgaagcgtccgcagaccagagcgatgcg
cctgcggcagagtccgccgagtcctcgcccatggtgaatgaggaggacattgcccagatc
gttgcctcctggaccggtgtgccggtgcagaagctcaccgagagcgaatcggtgaagctg
ctgaacatggaggagacgctgcaccagcgtctgatcggtcaggacgaagcggtcaaggcg
gtgtccaaagccatccgtcgggcccgtgtcggtctgaagaacccgaatcgtcccatcgcc
agcttcatcttctccggccccaccggtgtcggtaagaccgagctcaccaaggctctggcc
acctacttcttcggcagtgaggaggcgatgatccgcctcgacatgtcggagttcatggag
cgccacacggtcagcaagctgatcggctcgcctccgggctatgtgggcttcaacgaaggc
ggtcagctcaccgaagcggtgcgacgccgcccctacaccgtggtgctgttcgatgaaatc
gagaaagcgcaccctgatgtgttcaacctgctactgcagctacttgaagatggccgtctg
accgattccaagggccgcacggtcgacttcaagaacaccctggtgatcatgacctcgaac
atcggttcgaaggttattgagaagggtggcggtggccttggtttcgagttctctggtgag
agtgctgaggagtctcaatacacccgcatccgctcgctcgtgaatgaggagctgaagcag
tacttccgccctgaattcctcaaccggctcgacgagatcatcgtgttccgtcagctcagc
cgcgatgaggtgaaggagatcgccgaaatcatgctgaaggaagtcttcggccggatgggc
gagaaaggcatcaccctcaccgtgtccgatgcgttcaaggagcggttggtggaagaggga
tacaacccggcctatggagctcgccccctgcgtcgcgctgtgatgcggttgctggaggat
tccctggcagaggaagtgctctccggccggatcaaggatggtgaccatgccgaggtggat
gtcgacgacgacaagaaagttgtcgtccgccacaaaggtctggctgagagctctcctcaa
ttggcaggtgcggctgtctga
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