Parasynechococcus marenigrum: SYNW1254
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Entry
SYNW1254 CDS
T00144
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw00300
Lysine biosynthesis
syw00470
D-Amino acid metabolism
syw01100
Metabolic pathways
syw01110
Biosynthesis of secondary metabolites
syw01120
Microbial metabolism in diverse environments
syw01230
Biosynthesis of amino acids
Module
syw_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SYNW1254 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SYNW1254 (dapF)
Enzymes [BR:
syw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SYNW1254 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
CAE07769
UniProt:
Q7U6T2
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All DBs
Position
complement(1248550..1249644)
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AA seq
364 aa
AA seq
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MLQFSKYQGLGNDFLILEGRQGQLPQSVVEPDPVWVRQLCDRRFGIGGDGVILALPPQGQ
GDLRMRIFNADGSEAEMCGNGIRCLARFLADSDGDAPGKRWAIETPAGLIRPELQSDGQL
RVDMGAPFLEPSSIPTTLPLVDGLARGSADLADRALEVAAVGMGNPHVVVPVEDLNAIPF
DAWGAALEVHHLFPAKTNVHFLQVHARNRLEIRVWERGAGPTLACGTGACATLVAAVLLG
LADDHAEVMLPGGPLQIAWPGRHGAVLMTGPAVAVFDGVLSPDLMPVGESLVAEPLTPDV
ADNAPFDCSRDCVDSCQQPDNCLRDAAQQQVQAFLNSTSLDAMLNLASESLEQRTRARFE
RDTL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagttcagcaaatatcagggacttggcaatgacttcctgatcctggaagggcgg
caagggcagttgccgcaatcggtcgttgagccggaccccgtctgggtgaggcagctctgc
gaccgacgcttcggaatcggtggtgacggcgtgattcttgcgctgccgccccaggggcag
ggtgatctgcgcatgcggattttcaacgccgacggcagcgaggcagagatgtgtggcaat
ggcatccgctgcctggcacgttttcttgccgacagcgacggtgacgctcctggaaaacgc
tgggcgatcgaaacaccggcgggcctgatccgtccggagctgcaaagcgatggtcagttg
cgcgtcgacatgggtgctcccttcctggaaccctcaagcattcccacaactctcccgctg
gtggacgggttggcgaggggatcggccgatcttgcggatcgagcgctggaggtggcagcg
gttgggatgggaaatccccacgtcgtggtgccggtggaggacctcaacgcgattcccttc
gacgcatggggggcggccctggaggttcaccatctgttcccggccaaaaccaacgtgcat
ttcctgcaggtgcacgcccgcaaccgtctggagatccgtgtgtgggaacgcggtgctgga
ccgacgctggcctgtgggacaggtgcctgcgccacccttgttgctgctgtcctgcttgga
ctggctgacgaccatgccgaggtgatgctgcccggcggtccactccagattgcctggcct
ggacgccatggtgctgttctgatgacgggtccggccgtggcggtgttcgatggggtgttg
tcaccggacctgatgccggttggagagtcactcgttgcagagccgttgacgccagatgtc
gcggacaacgcgcccttcgactgttcccgtgattgtgtggacagctgccaacaaccggac
aactgtctgcgtgatgctgcccagcagcaggttcaggccttcctcaacagcacctcactg
gacgccatgctgaatctggccagtgaatctctcgagcaacggactcgggctcggtttgag
cgtgacaccctctga
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