Parasynechococcus marenigrum: SYNW1488
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Entry
SYNW1488 CDS
T00144
Name
(GenBank) conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syw02000
]
SYNW1488
Transporters [BR:
syw02000
]
Other transporters
Pores ion channels [TC:
1
]
SYNW1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
YhdP
DUF748
AsmA
Motif
Other DBs
NCBI-ProteinID:
CAE08003
UniProt:
Q7U652
LinkDB
All DBs
Position
complement(1438776..1443188)
Genome browser
AA seq
1470 aa
AA seq
DB search
MREARRLSRSLILISSAAVGVGSVLAVQTLDRTADEVLASFRGPLERSIGTALGHPITFG
PYKGLRPWGVALGETTIAPTRTDRSTIKVQGLSVHLDPLASLRQWQPVLRLKLQGLDVAL
DRQPDGRYWRFGEVSQDGEAPPDLDLRFELAQPARIRLTPSGDEIQLTSRGSVQIARQRF
SAISRLSRLGRAGSLDLEAKGRWDRPELVLSSRLRSLDLSTLEAVLPGSDATGLAGQAGG
DLAIQWTPSRFLCQGQLKVKDLELHNTTLPDPLRSSAVGVSCRGDRVSLIRSRFRMGDWR
ADARGSVQLDGAVDLRINVASLKRKDRAQLQLDGPWSNPRWRMAGVVTVPELDGPLRVQG
QLRTPWIDPEARQIQVQTALLTSPGLRLHLEGTIDEQIDLRSRELSLAPSLWQRWPALKQ
TLGETSDISGALLASGSLASPALSLELAQDRNLVVQRWDLRASWSKASGLMALDRFNSPV
LRAAAQLPVSWHNGAPQLGALKAGFALTSLPLARLSAVTPLPLQGHLSARGRLQGPFDDV
KTTVALDLLRPGAGPLRLPERWQGQVTGSTASAFNLRLASQAPDTDGALKVRLGSSGWPL
QADLRRGTGSLTVRSGAKGQVEWNADQLSIAGLQLTLPSGSASGSLQGSLSGDGVLALQP
VELVGAVQLEDPQLRGLGLNRIELEGRVSGGRFRALGRLQPQQGEIQLTAEGRVGADLRS
RIEASGLDVPWLVQMARQLRGSQLTATGTPVRAEDLGRLMIDTFGGSLDGHLRALQRSRQ
WLEAYERDHPQARVDPGDLRGRLDAVLNLSGPDLASLSLEAEARAHLWMQGDDQDRMLQL
DPLVAQLSGPLQGGQGRFSLLHLPFSLLALAVPVPSALRGAIGATGSYDLSGAGPLLTTE
LALEQARFGEQELRLERRAVVLSSKGLEVDLALRSIDAAEALQMRGTVPLSLRDALDLEL
ESHGDALSFLAAPAGDALRLTRGSSDLRLLLSGYLDQPQANGFLVIRDGAFTAADQTLKQ
VNASLLFDFNRVEVSQLEATLALGGTISAEGAIGLFIPRDEETPLTIRLTKGTIRQEMVD
LAADADITVRGALSQPLISGQLNLRNGVIQPRSGLLSRLRKGGGASLQQGIQPSQANVST
PFSTAALLEEGWDFQDPLVLFGPGAPAQLPAAFQDLMPDLSAVRFRNFRLGLGPDLQVRM
PPLISFRGGGQLLVNGPLDPSLELRGLIRLNRGRVSLFSTTFRLDPRAPNVAVFTPSLGL
VPFIDIAMKTRVSDAVQPGTAGNASSANVFDTNGLGDGGGQLRLVKVTVEAAGPADRLIG
NLDLRSVPPMSQPQLLALIGGNSLSGLAGAGGAALATVLGQSLLSPVLGTLTDAMGQRLQ
IALFPTYVTPDIKDEDERRSGRVAPTFTLVTEIGVDVTDRFDFSVLAAPNTSDVPPQATV
TYQVTPNTALSGSVDSNGIWQSQLQLFFRF
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagcgcggcggttgtccagatccttgatcctcatttccagcgcggctgttggt
gtcggatctgtcctggcggtgcagaccctggatcgcacggctgatgaggtgcttgcttcg
tttcgcggaccactggaacgcagcatcggtaccgctctcggtcacccgatcacgttcggt
ccttacaaggggttgaggccatggggtgtggccctgggcgagacaaccattgccccgacg
cgtactgatcgctccacgatcaaggtccagggcctgagtgtccatctcgaccctttggcc
agcctgcggcaatggcagccggtgttgcggctgaagctgcagggcctcgatgtggccttg
gatcgccaaccggacggtcgctattggcggttcggagaggtttcgcaggacggggaggcc
cccccggatctggacctgcgctttgaactggctcaaccggcccggattcgcctcaccccc
tctggagatgagatccaactgaccagtcgtgggtctgtgcagatcgcgcggcagcgcttc
tcagcgatctcgcggctgagtcggctcgggcgagccggcagccttgatctggaggccaag
gggcgttgggatcgtccagaactggtgctgagcagtcgtctgcgatccctggatctctcc
acactggaggccgttctgcctggatcggatgccacgggcttagcgggccaagcaggtggt
gacctggcgattcagtggacaccaagccgctttctctgccaggggcagctgaaggtcaag
gatctcgagctgcacaacacaaccctgcccgatcccctgcggtcatccgccgtcggagtg
agctgtcgcggcgatcgggtcagcctgattcgcagtcgtttccgcatgggtgactggcgg
gctgacgccagggggtcggttcagctggatggagctgtggatctgcggatcaatgtggcg
tccttgaagcgcaaggatcgcgctcaactccagctggatggcccctggtccaatccccgt
tggcgtatggcgggggttgtgaccgtgcctgaactcgatgggcctttgcgagtgcaaggc
cagctgcgcaccccctggattgatcccgaagcccgccagatccaggttcaaacagccctg
ctcacctcacccggcctgcgcttgcatctggagggcacgatcgacgagcagatcgacctg
cgcagtcgtgaactcagcctggcgccgtcgctctggcagcgatggcccgccctgaaacag
acccttggcgagacatccgacatctccggagcgcttttagcgagcggttccctggcatca
ccagcgctgtcactggagttggcccaggaccgcaatcttgttgtgcagcgatgggatctc
cgcgcgtcctggtcgaaggcctccgggctcatggccctcgatcgtttcaacagtcctgtt
ctgcgtgcagcggcgcaactccccgtcagctggcacaacggcgcgccgcagctcggggcg
ctgaaagccggcttcgcgttgacctcactgcccctggcccgcctgtcggccgtcacaccc
cttcctttgcaaggccatctgtccgcccgcggccgattgcagggcccttttgatgatgtg
aagaccactgtggcgttggatctcctccggcctggtgccggaccgttgcgattgccggag
cggtggcagggacaagtgactggatcaaccgcatcggcgttcaacctgcgcctggcatcg
caggctcctgacacggatggagcactgaaggttcggctgggttcctccggttggccattg
caggcagatcttcgtcgtgggaccggcagcttgaccgtgcgttccggcgccaaaggtcag
gtggagtggaatgccgatcagctgtcaatcgcgggtcttcagctgacgctcccttcggga
tcggcatcaggctcgttgcaggggagtctgagtggcgacggcgtcctggccctgcaaccg
gtggagctggttggtgctgtgcagctggaggacccgcagctccgtggacttggtctgaat
cggatcgagttggagggacgtgtctcaggagggcgcttcagagcccttggccggctgcag
ccgcagcagggtgagattcagctcaccgctgagggacgggtcggggctgatctgcgcagc
cggattgaagcctctggactcgatgtgccctggttggtgcagatggcccgtcagcttcgt
ggcagccagctcaccgccacggggacacctgttcgtgccgaggatctcggcaggttaatg
atcgacaccttcggcggcagtctcgacggtcatctgcgcgcgcttcagcggtctcggcag
tggcttgaggcctacgagcgtgatcatccccaagcgcgcgttgatccaggtgacctgcgc
ggtcgcctggatgctgtcctcaacctttcaggcccggatctggcatcgctctcgctggag
gcggaggcccgggctcatctgtggatgcagggtgatgatcaggaccggatgcttcagctg
gaccccttggtggctcagctgagcggtcctctgcagggcggccagggtcgcttcagcctt
ctgcatctgcccttttcgctactggccttggccgttccggttccgtccgcgttgcgtggg
gcgatcggtgccaccggctcctacgacctgtcaggtgccggtccgttgctcaccactgag
ttggccctggagcaggcacggttcggtgagcaggagcttcgtcttgaacgccgagccgtt
gtgttgtcctcaaaaggtcttgaagtcgatctcgcactccgcagtatcgatgccgctgag
gccttgcagatgcgcggcactgttccgctgtcactgcgtgatgcgttggatctcgagctt
gaaagccatggggatgcgctgagcttcctggcggccccggccggcgatgccctgcggctg
acacgcggcagcagtgatctgcggttgctgctcagcggatacctggatcagccccaggcc
aatggatttctggtgatccgtgacggtgctttcacggccgctgatcaaaccctgaagcaa
gtcaatgcgtcccttttgtttgatttcaaccgggttgaggtcagccagcttgaggccacc
ctggcgttggggggcacgatctcggctgagggggccatcggtctgttcattccccgtgat
gaggagacaccgctcaccattcgcctgaccaaagggacgatccggcaggagatggttgat
ctggctgcggatgcagacatcacggtgaggggcgcgttgagccagccgctgatcagtggc
cagctcaacctccgtaatggggtgattcagccccgcagcggcttgctgtcgcgtcttcgt
aagggtggtggcgcctcattgcagcaggggattcaaccgtcgcaggccaatgtctcaacg
ccattctccaccgcagcactgcttgaagaaggctgggatttccaagaccccctggtgctg
ttcgggcctggtgcccccgcccagttgccggcggcttttcaggatctgatgccggatctt
tcggcggttcgtttccgcaacttccgtcttggtctggggcccgatctgcaggtgcggatg
ccgccgctgatcagtttccgtggtggtggtcagctgctggtcaatggaccgttggatccg
tcgcttgagctgcggggcctgattcgtctgaaccgcggccgggtcagtctgttttccacc
accttccgcctcgatccacgtgctcccaacgtcgcagtgttcaccccatcgctgggattg
gtgccctttatcgacatagcgatgaagaccagggtctcggatgcggtgcagcccgggacg
gctggcaatgccagctcggccaatgtcttcgacaccaatggtctcggcgatgggggtggc
cagctgcggttggtgaaggtcaccgtggaggccgccggaccggcggatcgtttgatcggc
aatctcgatctgcgcagtgtcccgcccatgtcgcagccgcagctgttggcgctgatcggt
ggcaactctctgtcaggcctggctggagccggtggagccgccctggcgacggtgctggga
cagtcgctgctttcaccggttctcggaacgctcaccgatgcaatgggacagcggctccag
atcgccttgttccccacctacgtcacaccggatatcaaggatgaggatgagcgcaggtct
gggcgggtggctcccaccttcacgctggtgacagaaatcggtgttgatgtgaccgatcgc
tttgatttctcggtgcttgcagctccgaacacctcggatgtcccccctcaggcgacggtc
acttaccaggtgacacccaacacggctttgtcagggtccgtcgattccaatggcatctgg
cagagccagctgcagctgttcttccgcttctga
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integrated database retrieval system
