Parasynechococcus marenigrum: SYNW1701
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Entry
SYNW1701 CDS
T00144
Name
(GenBank) possible mechanosensitive ion channel, MscS family
KO
K03442
small conductance mechanosensitive channel
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syw02000
]
SYNW1701
Transporters [BR:
syw02000
]
Other transporters
Pores ion channels [TC:
1
]
SYNW1701
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Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
Motif
Other DBs
NCBI-ProteinID:
CAE08216
UniProt:
Q7U5K2
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All DBs
Position
complement(1634638..1636290)
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AA seq
550 aa
AA seq
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MFRLRRRLGLWLTAALLALIPLVAQASILDFIPAGPARSSAQQQDEQALFEGKFELAKVR
ILGVPAITVASPVQLGDQSGIEASVRARVIEGNLRALYDPNQLCSFGERLSEWMLDSLLQ
SDAHVCTAGQRYGLDRSGTPLTLEVLRNGNGPYELAARLPGREQPFPLLTVTRADAEING
ARELALVLELLLLLLFSAMLLLWRRLRQRTSRLHGELRTQGRSDRRSETRLHAEQALSIG
VLLLMLYLLVLMIGVLVVAIPGKVPLGIELVLQPSLAVIKFLAVTLAAFLLRSLSTFLLS
QWAADVDVPQRLQARRQQRYRSLLSTTHRLINVVGIGVVLLWVLLDIPGVRSASVSLLLA
GGALLGALAFVFQGLLRDFSAGLVMLLEDRYAIGDWIEVEGIEGEVIEMGLFSTQIRCLD
QRMNILDISSILQMQNHTKLRSGSLVTFVISHRQTDLEIVYRTLAFEIEAFALDPVWGNR
LLGDPILRGIKRTTALGVQMQVLLVTRAGEQWTTEREFQRRVLRALHRRGVQLADGLDLG
SAQPPMAGGR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgttccgtctcagacgacgcctggggctctggttaacggcagcgctgttggcgttaatc
ccgctcgtggctcaggcgtcgatcctggatttcatccctgccggtccggcgagatcttct
gctcaacagcaggacgagcaggcgttgtttgaagggaaattcgagctggccaaggtccgg
attcttggggtgcccgccatcaccgtcgccagccctgtgcagctgggggatcaaagcggg
attgaggcctcggtgagagccagggtgattgagggcaatctgcgcgccctctacgacccg
aaccagctctgcagtttcggcgagcgcctcagcgagtggatgctggacagccttcttcag
tccgatgcgcacgtctgcacggctggtcagcgctacggcctggatcggtccggcacgccg
ttgaccctggaggtgctccggaatggcaatggtccctacgagctggcggcacggctgccg
ggacgcgagcaacccttcccactgttgaccgtgacccgtgccgatgcggagatcaatggc
gcgcgtgagctggccctggtgttggaactgctgctgctgttgttgttttcagccatgctg
ctgctctggcggcgactgcggcaacgcacctcacgcctgcatggtgagctgcggacccag
ggccgctctgatcgcaggagcgaaacccggttgcacgccgaacaagccctgagcatcggc
gtgctgctgctgatgctgtatctgctggtgctgatgatcggcgtgctggtggtggccatc
cccgggaaagttcccctggggattgagctggtgttgcagccatcgcttgctgtgatcaag
tttctggcggtaacgctggcagcgttcctgctgcgcagcctcagcactttcctgctcagc
cagtgggcggcggatgtggacgttccccagcggcttcaagcccggcgtcagcagcgctat
cgcagtttgctgagcacaacgcatcggttgatcaatgtggtcgggatcggggtggtgctg
ctctgggtgctgctggatatccctggcgttcgttccgcctcggtgtcgctgttgctggct
ggtggcgccctgctgggcgcgctggcgtttgtgttccagggattgctgagggatttttct
gctggtctggtgatgctgctggaggaccgctacgccattggcgattggatcgaggtggag
ggtatcgagggagaggtgattgagatgggcctgttcagcacacagatccgctgcctggac
caacgaatgaacatcctggacatttcctcgatcctgcagatgcagaaccacacgaagctg
cgctcgggaagtctggtcacctttgtgatttcacatcgacaaacggatctggagatcgtc
tatagaaccctggcgttcgagattgaggcctttgctctcgaccctgtgtggggcaatcga
ctgctgggggatccgatcctgcggggcatcaaacgcaccacggcgcttggggtgcagatg
caggtgctgctggtgacccgcgccggcgagcaatggacgacggaacgggagtttcaacgc
cgtgttctgcgtgcgttgcatcgccgaggggtgcagctggcggacggattggatctgggc
agcgcgcagcctccaatggcaggaggccgctga
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