Parasynechococcus marenigrum: SYNW1782
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Entry
SYNW1782 CDS
T00144
Symbol
priA
Name
(GenBank) primosomal protein N' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYNW1782 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW1782 (priA)
Enzymes [BR:
syw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNW1782 (priA)
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYNW1782 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
Helicase_C
ResIII
PriA_3primeBD
Zn_ribbon_PriA
AAA_16
zf-CHY
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAE08297
UniProt:
Q7U5C5
LinkDB
All DBs
Position
complement(1709712..1711955)
Genome browser
AA seq
747 aa
AA seq
DB search
MKFSGLCNPSEKPPDLVEVWLEAGREGRTFTYSADAALGLQAGDLVQVRLRGRPLHGLVV
ARYNVSLGATVPDKVQAVEGLVQQAAVDPQWRLWLEGVAERCHLSVFRMLKAALPAGWLG
QARTLSEGRALLWVERLQPPVPAPPLTSRQQQLLNALDVAGSGLWQRSLEASGFSPSMVR
VLETKGWVRRDRRPLSTGVMSVAPLEAARPLTSEQQQVMQRFEAVPDGEGMLLWGITGSG
KTEVYLQLAEKELAAGRHVLILTPEIGLIPQLVDRCRRRFGSRVLEYHSGCRDRERLQVW
RRCLAPEQPLLVVGTRSAVFIPLSPLGLVVLDEEHDSSYKQAAPMPCYHARDLAWDRIRA
GGGRLVLGSATPSLDSWVQLHPDGPLRLGRLTQRISQQSLPPVHVVDMRHELAEGHRRLI
SRPLMDRLAELPEKGEQAVILVPRRGYSPFLGCRSCGEVVMCPNCDVALTVHRGSGGRQW
LRCHWCDHRDEIGNRCAHCGSTAFKPFGAGTQKVMELLNEELDGLRLLRFDRDSTGGRDG
HRRLLDRFASGKADVLIGTQMLAKGMDLPQVTLAAVLAADGLLHRPDLRASEQALQLLMQ
LAGRAGRGERPGQVLVQTYCPDHPVIRHLVDGRYEAFLAQEVQLRREAALVPFSRACLLR
LSGESASATATAASVLAERVRPLCRDRGWWLLGPAPAPVARVAGRSRWQLLLHGPVGSPL
PLPPGPTLWDELPRGVALAVDPDPLEL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttcaggcctttgcaacccctccgaaaagcctcctgatctcgttgaggtctgg
cttgaggctgggcgtgagggcaggaccttcacctacagcgccgatgcagcacttggattg
caggccggcgatctggtgcaggtgcggctgaggggacgccctctgcatggattggtggtt
gccagatacaacgtgtccttgggggccacagtgccggacaaggttcaggcggttgaaggc
ctggtgcagcaagctgccgttgacccccagtggcgcctctggcttgagggtgtggctgaa
cgctgccatctcagtgtgttccggatgctgaaagcagccctacccgccggttggctgggc
caggcccggaccctgtctgaaggtcgtgccctgttgtgggtggagcggttgcagccaccc
gtgcccgctccgcctctcacgtcccgccagcagcaactcctgaatgcgctggatgttgcg
gggtcgggactgtggcagcgctcgctggaagcctcgggcttcagcccatccatggtccgg
gtcttggagacaaaaggctgggtgcgccgggatcggcgtcccctctccacaggggtgatg
tctgttgccccactggaggccgctcggcccctcaccagcgagcagcagcaggtgatgcag
cgctttgaggccgttcccgatggagaggggatgctgctttggggcatcaccgggtcgggc
aagaccgaggtatacctgcagttggcggagaaggagttggcggccggccgtcacgtgttg
atcctcacccctgaaatcggcctgattcctcagttggtggatcgttgccgacgtcgcttc
ggctccagggttctcgaatatcacagcggttgccgggatcgagagcgcctccaggtgtgg
cgccgctgcctcgcgcccgagcagcctctgctggtggtgggaacacgctcagcagtgttc
attcccctctcgccactggggttggtggtgctggatgaggaacacgacagctcatataaa
caggccgcaccgatgccctgctaccacgccagggacctggcttgggatcggattcgtgcc
ggtggtgggcgcctggtgctcggcagcgccaccccatcactggacagctgggtgcaactg
catcccgatgggcccctgcgtctgggacgtctgactcagcggatctcccagcagtctctg
cctcctgtccatgtggtggacatgcggcatgagctcgccgaaggacaccgtcgactgatc
agtcgtccgctgatggatcgattggccgagctgccggagaagggggaacaggcggtgatc
ctcgtgccacgacggggctacagcccttttttggggtgccgtagttgtggggaggtggtg
atgtgcccgaactgtgatgtggcgctcacggtccaccgcggttccggtggtcgtcagtgg
ctgcgttgtcactggtgtgatcaccgagatgagatcggcaaccgttgcgcccattgcggg
tccaccgccttcaagcccttcggtgccggaacccagaaggtcatggagttgctcaatgag
gaattggatgggctgcggctgctccggttcgaccgtgactccaccggtggtcgtgacgga
caccgtcgcttgctggatcgttttgcctccggcaaggcggatgtgttgatcggaacccag
atgttggctaagggcatggaccttccccaggtgacgctggcggcggtgctggcggcggat
ggcctgttgcaccgtcccgatctacgggcctcagaacaggctctgcaattgctgatgcag
ctggcgggtcgtgctgggcggggcgaacgccccggtcaggtgctggtgcagacctactgc
cctgaccatcccgtgattcgccacctggtggatggccggtatgaggctttcctggcccag
gaggtgcagctgcggcgggaggcggcgctcgtgcccttcagccgcgcctgtctgctgcgg
ttgtccggtgagtccgccagcgccaccgccacggcggcatcggttctggcggagcgggtg
cgtcctctctgtcgcgaccgtggctggtggttgttggggcctgccccagccccggtggca
cgggtggcagggcggagccgatggcagttgctgctccacggtccggtgggctcccccctg
ccgcttccccccggcccgaccctctgggacgaacttcctcgaggtgtggctctggcggtg
gatcctgatcccctggagctgtag
DBGET
integrated database retrieval system
