Parasynechococcus marenigrum: SYNW1807
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Entry
SYNW1807 CDS
T00144
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYNW1807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW1807
Enzymes [BR:
syw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SYNW1807
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SYNW1807
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
WBS28
Motif
Other DBs
NCBI-ProteinID:
CAE08322
UniProt:
Q7U5A0
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All DBs
Position
1733077..1733913
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AA seq
278 aa
AA seq
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MRIATWNVNSVRTRLEQVLCWLEQTKPDLLCLQETKVDDPLFPMQAFENAGWQVSIHGQK
SYNGVALVSREPLEDVRCGFVGELPDDAEAATLGEQRRVISGLLDGVRVLNLYVPNGSSL
SSEKYPYKLTWLGCLKRYLDAQAERGEPLCMVGDFNIALEARDIHDPDRLSGSVMASDAE
RDALREALGNRLQDAFRMFEPDAGHWSWWDYRTGAWDRDRGWRIDHIYLCEELMGLARSC
SIHKQLRGNVQPSDHAPVSVDLDWPPADDDQDEDDQLF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgcggattgccacctggaacgtcaattcagtgcgcacccgccttgagcaagtgttgtgc
tggcttgagcaaaccaagccagatctgctctgcctgcaggagaccaaggtcgacgatcct
ctgtttcctatgcaggccttcgagaacgctgggtggcaggtcagcatccatggccagaag
tcgtacaacggagtggcgttggtcagccgcgagcccctcgaagatgtccgctgcggtttc
gttggtgagctccctgacgatgccgaagccgcaaccctgggggaacagaggcgcgtgatc
agtggcctgctggatggggtgcgggtgctgaatctctacgtaccgaatggttcgagcttg
tcttcagaaaaatatccctacaagttgacctggcttggatgcctgaagcgctacttggac
gcccaggccgaacgaggggaaccgctgtgcatggtgggggacttcaacatcgccctcgag
gcaagggacatccacgaccccgatcgcctcagcggctcggtcatggcgagcgatgcggaa
cgggatgccttgcgcgaagccctggggaaccgcctccaagacgccttcagaatgttcgag
cccgacgccggccactggagctggtgggactaccgcaccggggcctgggatcgagatcgt
ggctggcgcatcgatcacatctacctctgtgaggagctgatggggctcgcccgcagctgc
agcatccacaaacagctgcgtggcaacgttcaacccagtgatcatgcgccagtaagcgtt
gatctggactggcctcctgctgacgacgaccaagacgaggacgatcagctgttttga
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