Parasynechococcus marenigrum: SYNW1961
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Entry
SYNW1961 CDS
T00144
Symbol
FPG
Name
(GenBank) Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYNW1961 (FPG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW1961 (FPG)
Enzymes [BR:
syw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SYNW1961 (FPG)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SYNW1961 (FPG)
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SYNW1961 (FPG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CAE08476
UniProt:
Q7U4V2
LinkDB
All DBs
Position
1867376..1868212
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVRRGLADRLSLFEIERVEVCRSRAIASSGGVAAFLVGLTGARVGTWSRRGK
YLMAALEPNRGIWGVHLRMTGQFQWIEEPSTPCTHTRVRFWNANGHELRFVDVRSFGEMW
WVPPDVELTVGIPGLARLGPEPFSEAFSAPYLKRQLKNSSRPIKTALLDQALVAGVGNIY
ADESLFSAGIPPLTPAGRLTLAQLERLRSSLVEVLTTSIGAGGTTFSDFRDLEGVNGNYG
GQAWVYRRGGEPCRRCGTIIRRDKLSGRSTHWCPTCQG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaactccctgaggtcgagacggttcgccgaggtctggcggaccgtctctctttg
tttgaaattgaacgcgtcgaggtctgccgctcgcgagcgattgccagcagtggcggtgtc
gctgcctttctggtgggactgactggtgcaagggtcggaacctggagccggcgcggaaag
tacttgatggcagcgcttgaacccaaccgcgggatttggggggttcatctgcgcatgact
gggcagtttcagtggatcgaggagcccagcactccctgcacgcacacccgcgtgcgcttc
tggaacgccaacggccacgaactgcgcttcgttgatgtgcggagtttcggcgagatgtgg
tgggtccctcccgacgtggagctcactgttggaatcccggggttggcgcggctgggaccg
gaaccgttcagcgaggccttcagcgctccatacctcaagcggcaactgaagaacagcagc
cgcccgatcaaaacagcacttctggatcaggccctcgtggcaggtgtgggcaacatttat
gccgatgaaagcctgttctcggcgggcatccccccgctgacccccgctggacggctcacg
cttgcccagcttgagaggttgcgctcatccctggtggaggtgctcaccaccagcattggt
gccggcggcaccaccttcagtgacttccgtgatctggagggcgtcaacggcaattacgga
ggccaggcctgggtgtatcgccgagggggagaaccgtgtcggcgctgcggcacgatcatc
cgacgggacaagctgtcgggacgcagcacccattggtgcccgacctgtcagggctga
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integrated database retrieval system
