Parasynechococcus marenigrum: SYNW1989
Help
Entry
SYNW1989 CDS
T00144
Name
(GenBank) Possible phycobilisome linker polypeptide
KO
K02286
phycocyanin-associated rod linker protein
Organism
syw
Parasynechococcus marenigrum
Pathway
syw00196
Photosynthesis - antenna proteins
syw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SYNW1989
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syw00194
]
SYNW1989
Photosynthesis proteins [BR:
syw00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
SYNW1989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
Motif
Other DBs
NCBI-ProteinID:
CAE08504
UniProt:
Q7U4S4
LinkDB
All DBs
Position
1896172..1897074
Genome browser
AA seq
300 aa
AA seq
DB search
MIAIKPTRDFTNLGRISFSANNASKPKQNTAINRYRAEQTQGGLISRKGLAASSQNEYKE
NLCSAMGIGIGPRVHSECPFSSVNDQYAATGNEALEVAIEAAYRQVLGNLGPTISQKCIE
LESQLKNGEISVRDFVAGLAKSDLYRENYFSKVSPIRGIELNYKHLLGRPPINQAEVSAA
ISLIASKGFNAFIDQITRSGEYLEVFGTDTVPYLRAWTSEARAYCSTFANLARVTPGNAS
SDTIVERRSQLVVEFSNARSLSEAGNKYEVSGFSYSKATSDPTSAAFLRMYQSKTAKSWN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccatcaagccgacccgcgacttcacgaatcttggccggatttcattctccgcc
aacaacgcctccaaacccaaacagaacaccgcaatcaatcgctaccgagccgaacaaacc
caggggggtttgatatcgcgcaaaggcctggctgcatcctcacaaaacgagtacaaagag
aatctttgctcagcgatggggattggaatcggccccagagttcacagcgaatgtcctttt
agcagtgttaatgatcaatatgctgcaacagggaacgaagctcttgaggtggcaatcgaa
gcggcatatcggcaggtactcgggaatcttggaccaacgatcagtcagaaatgcatcgaa
cttgaatcgcaactaaagaatggcgagataagcgtcagagatttcgtggcgggacttgca
aagagtgatctctacagggaaaactacttttcgaaagtttcgccaatccgcggcatcgag
ctgaactacaagcaccttctcggtcggccgccgatcaatcaagcagaagtaagtgctgcc
ataagccttatcgcatccaaaggctttaatgcgttcatcgatcagatcacacggtctggg
gaatacctagaggttttcggaacagacacagttccatacctgcgtgcatggacatcagaa
gcacgcgcctattgttcaacttttgccaaccttgctcgcgtcactcctggcaatgcaagc
tcagacactattgttgagcgacggagccaactggttgttgagttcagcaatgcacgtagc
ctgagcgaggctggcaacaaatatgaagtcagtggcttctcttattccaaagcaacaagc
gatcccacctctgcggcattcctcagaatgtaccaatccaaaacagcaaaatcctggaac
taa
DBGET
integrated database retrieval system
